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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0054600 |
| Transcript ID | LotjaGi3g1v0054600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | L-gulonolactone oxidase; TAIR: AT5G11540.1 D-arabinono-1,4-lactone oxidase family protein; Swiss-Prot: sp|Q9LYD8|GGLO3_ARATH L-gulonolactone oxidase 3; TrEMBL-Plants: tr|A0A0S3RMW2|A0A0S3RMW2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0054600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5705130..5708366) extracted from Lotus japonicus Gifu genome v1.2.
CGACAATCCAATAAAGTAGTAATGATTTTGTTGCGTAATCAGTTCAGTATAAACGTTACCACCAAGAAATTCAAACGACA AAAACAAAAAGCAACACAAAACTGAAAACCCATTCACCACCACCACCACCACCACCTCCTCCTCCGTCCAATGAATCCAA TGGGTAGTAGTAGTAGCAGCAGGTATAAGTATTGGACATGGTGGGTTTTGAGCATCATCATTCACACACTTCCTTTTCCA CTCATCCATGGAATGGTGCCAGAGTCCCCTGTTCAATGCAACCAATCCGGCTGCACACTCCTTAACTCCTACGGCACCTG GAACGACCGCAAAGACTGTCATGCCCTCAACGTCACCTACCCCACCACCGAGCAACAGCTCCACTCCGCCGTCTCCTACG CCGTGCAGAACCACCTCAAAGTCAAAGTCGTCACCAAATTCTCCCACACCATTCCCAAGCTCGCATGTCCTTCTTCACAA GCCAACACTCTGCTAATCAGCACTGAGAAGTACGACACAGGGATCGAAATCGATGCGGCGAATCTGGCTGTGACGGTGGC TTCCGGTGTGGGGTTGCGGCGGTTGATTGATGAGGTGGAGCGTGGTGGGTTTAGTTTGGTGGCGGCGCCTTATTGGGAGG GTGTGAGTGTTGGAGGGTTGATTAGTACTGGTGCACATGGGAGTTCTTGGTGGGGGAAAGGTGGTGCTGTTCATGATCAT GTTCTGGGGATTAGTATTGTTGTTCCTGCTTCTAAATCTGAAGGGTATGCCAAGGTTTTGAAGTTGAAAGCACCAGATCC TCTGCTTAATGCAGCTAAACTGTCACTAGGTGTGTTGGGTGCCATCTCCAAGGTCAGTATTTGTTTGTTAGTATATAAGA TGATTTCATTTTTGAATTTAATGTGTATTTACAGACCGACAATGTAAAGAGTTTAACGTATGCATTTAATCACATCTTTC AATTTTTCATTTGTGACATGAGAAATTGATATATTCTAATCGGATGACGGTGTAAAACGATGTCAGATTGTCATAGTAAT TAAACTCAATCCATGTCTCACTCGTTAACTGTTCCTACTATGTGGCATATTGTGATTCACTCTCAGTGTGAAAAACTGTT TTGCATTGAGATTGTATCACAATTGAACTATTTTTTTCTTTGTGTTCTGAGTTCTGATTCATTAACCACTAAGACACCTT TCAGACACTCACTTTTTCTCTCTATCTTCCACATAAATCACTTATCTCTATATTCTTCCTATCTCATTCTAGGTCTCTTC ACCACTTGGATAATCCCCGAACATTTTCCATGTGTTCCTCATTTGAGAGTCTATGCCCAAAATATCTTTGTTTTCCTCAT TTGGAGTGTCTATACCAGTATATCCAAAATGGGTTGTCCAGAGTGATACAACCAAGTACCCATCAAAGTGACCTCCTTGT TTTAATTTTGATGATTATAAATGTTAACATACAGGTAACATTGTCACTTGAACATAGGTTCAAAAGAAGTATAACCTTCA ATTTCACGGATGATACTCATATTGAAGATGTGTACATAGACCATGCAAAGCAGTATGAGTTTGCAGACATAACTTGGTAT CCATCAAGACATACGGCTGTGTACAGGTATGATTCAAGGGTTCCCTTAAGTGCTTCTGGTGATGGACTCTATGACTTCAT TGGATTTCAACCCAATTCCATCTTGATCTCCGAAACTGTTAGAGGAGCAGGTAAAAATGCTCTCTTCTAACATCATAGAT ACTTTACATGTACATGGTGGCATATTGTTCTTATTATTAGCAACTTTAATATTTAGATATCCTAACACTAAATCCACTCT TTATAGATCATTTTTTTTTTCTATTTCTGATTTGTGTCCACTATGGTCTCAAGCACCCAAGAAACACTCAAATTAATGTG GATAAAATGATTATATAACTTGAGAAATTGCATATCCAATATCACAGCCTAAAAGTTTTAATAATATCCTACATGTTGCA AAATGCAGAGAAATTGCTGGAAAATACAAGAAACCCAAATGGGAAATGCGTAACGGCAGCTGCTACTTTGGGAGTGAAGA AATTAATAGCCAATGGGTTGAAGAACAATGGCCTTATTTTCAGTGGCTATCCAGTTGTGGGTTATCAAGGGAAAATGCAA ACTTCAGGTTCATGCCTATATTCAACAAGAACTGACACATCATGTGCTTGGGATCCAAGAATCAAAGGGTTGTTCTTCTA TGAGTCAACGGCAATCTTCCCTGCTTCCAAATTTGAAGACTTCATCCGTGACGTGAGAAAACTGAGAGATCTAAATTCAG AAAATTTCTGTGGGATAGACAACTACAATGGGATTTTAATACGCTTCATCAAAGCCTCAAGTGCATATCTAGGACAATCT GAAGACTCTGTAGTGATTGATTTCAACTACTATCGTGCAAACGACGCATCAACTCCTAGACTAAACCAGGATGTGTGGGA GGAAGTGGAGCAATTGGCATTCTTCAAATATGGGGCTAAGCCACATTTGGCTAAGAATAGGAACTTAGCATTCTTAGAGG TGCAAAATAAGTATCCAAAGTTTAATCTGTTTATTGCAGCTAAACAACAAATGGATCCACAAAATGTGTTCTCTAGTGAA TGGTCAGAAGCAATTCTGTATGGGAAGGAATCAGATAAAGTTGATGGCTGTGCTCTGGAGGGGCAATGCATTTGTAGTGA AGACAAACATTGCAGTCCACTAATGGGTTACAAATGTACCCATGGTCTCATCTATAAGGAAGCTAGAGTTTGTAGGTATT TACCACAACCCAAACCATCCTCCATTGTATAATGTATGATGTGCGTTTAATATTATACAAGTTTTTTTCCTACATTACAT AAGGTTTTAATAGGGATTAATATGGTTACATGATTATATATTCTTGAAATCGCGGAAATTGCTGAAGCCTATACTTCGCT TCGACTTTTGCAATCTTGTTCTCTATATCAGCAGCTATTTTCCTTCTCAGCTTCCAATTACTTCCGTGCTTCTGCAACCT TCTTTCTCTCATCCTCAGCAGCCTCCCTCTCAGATTTAGATCTCATCTTTTCTTTCTCAACAAGTTCTTTCTATCTATTG ATGTCCTTTTCTGAATCAGATATACCGGATTTCAGAACTTCCATATCCCCATTTCCTTCATGAGCACCTGCACCACGTAT CTGCTGCAATGCAGCAATCTAGGATTCTAAGGCAGAA
CDS sequence (LotjaGi3g1v0054600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCCAATGGGTAGTAGTAGTAGCAGCAGGTATAAGTATTGGACATGGTGGGTTTTGAGCATCATCATTCACACACT TCCTTTTCCACTCATCCATGGAATGGTGCCAGAGTCCCCTGTTCAATGCAACCAATCCGGCTGCACACTCCTTAACTCCT ACGGCACCTGGAACGACCGCAAAGACTGTCATGCCCTCAACGTCACCTACCCCACCACCGAGCAACAGCTCCACTCCGCC GTCTCCTACGCCGTGCAGAACCACCTCAAAGTCAAAGTCGTCACCAAATTCTCCCACACCATTCCCAAGCTCGCATGTCC TTCTTCACAAGCCAACACTCTGCTAATCAGCACTGAGAAGTACGACACAGGGATCGAAATCGATGCGGCGAATCTGGCTG TGACGGTGGCTTCCGGTGTGGGGTTGCGGCGGTTGATTGATGAGGTGGAGCGTGGTGGGTTTAGTTTGGTGGCGGCGCCT TATTGGGAGGGTGTGAGTGTTGGAGGGTTGATTAGTACTGGTGCACATGGGAGTTCTTGGTGGGGGAAAGGTGGTGCTGT TCATGATCATGTTCTGGGGATTAGTATTGTTGTTCCTGCTTCTAAATCTGAAGGGTATGCCAAGGTTTTGAAGTTGAAAG CACCAGATCCTCTGCTTAATGCAGCTAAACTGTCACTAGGTGTGTTGGGTGCCATCTCCAAGGTAACATTGTCACTTGAA CATAGGTTCAAAAGAAGTATAACCTTCAATTTCACGGATGATACTCATATTGAAGATGTGTACATAGACCATGCAAAGCA GTATGAGTTTGCAGACATAACTTGGTATCCATCAAGACATACGGCTGTGTACAGGTATGATTCAAGGGTTCCCTTAAGTG CTTCTGGTGATGGACTCTATGACTTCATTGGATTTCAACCCAATTCCATCTTGATCTCCGAAACTGTTAGAGGAGCAGAG AAATTGCTGGAAAATACAAGAAACCCAAATGGGAAATGCGTAACGGCAGCTGCTACTTTGGGAGTGAAGAAATTAATAGC CAATGGGTTGAAGAACAATGGCCTTATTTTCAGTGGCTATCCAGTTGTGGGTTATCAAGGGAAAATGCAAACTTCAGGTT CATGCCTATATTCAACAAGAACTGACACATCATGTGCTTGGGATCCAAGAATCAAAGGGTTGTTCTTCTATGAGTCAACG GCAATCTTCCCTGCTTCCAAATTTGAAGACTTCATCCGTGACGTGAGAAAACTGAGAGATCTAAATTCAGAAAATTTCTG TGGGATAGACAACTACAATGGGATTTTAATACGCTTCATCAAAGCCTCAAGTGCATATCTAGGACAATCTGAAGACTCTG TAGTGATTGATTTCAACTACTATCGTGCAAACGACGCATCAACTCCTAGACTAAACCAGGATGTGTGGGAGGAAGTGGAG CAATTGGCATTCTTCAAATATGGGGCTAAGCCACATTTGGCTAAGAATAGGAACTTAGCATTCTTAGAGGTGCAAAATAA GTATCCAAAGTTTAATCTGTTTATTGCAGCTAAACAACAAATGGATCCACAAAATGTGTTCTCTAGTGAATGGTCAGAAG CAATTCTGTATGGGAAGGAATCAGATAAAGTTGATGGCTGTGCTCTGGAGGGGCAATGCATTTGTAGTGAAGACAAACAT TGCAGTCCACTAATGGGTTACAAATGTACCCATGGTCTCATCTATAAGGAAGCTAGAGTTTGTAGGTATTTACCACAACC CAAACCATCCTCCATTGTATAA
Protein sequence (LotjaGi3g1v0054600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNPMGSSSSSRYKYWTWWVLSIIIHTLPFPLIHGMVPESPVQCNQSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSA VSYAVQNHLKVKVVTKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGFSLVAAP YWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLKAPDPLLNAAKLSLGVLGAISKVTLSLE HRFKRSITFNFTDDTHIEDVYIDHAKQYEFADITWYPSRHTAVYRYDSRVPLSASGDGLYDFIGFQPNSILISETVRGAE KLLENTRNPNGKCVTAAATLGVKKLIANGLKNNGLIFSGYPVVGYQGKMQTSGSCLYSTRTDTSCAWDPRIKGLFFYEST AIFPASKFEDFIRDVRKLRDLNSENFCGIDNYNGILIRFIKASSAYLGQSEDSVVIDFNYYRANDASTPRLNQDVWEEVE QLAFFKYGAKPHLAKNRNLAFLEVQNKYPKFNLFIAAKQQMDPQNVFSSEWSEAILYGKESDKVDGCALEGQCICSEDKH CSPLMGYKCTHGLIYKEARVCRYLPQPKPSSIV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 34 | 34 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 36 | 25 | - | – | |
| PANTHER | 21 | 585 | 565 | 1.4E-289 | – | |
| PANTHER | 21 | 585 | 565 | 1.4E-289 | – | |
| Phobius | 37 | 593 | 557 | - | – | |
| TIGRFAM | 37 | 582 | 546 | 1.0E-262 | ||
| Gene3D | 51 | 121 | 71 | 2.6E-6 | ||
| SUPERFAMILY | 51 | 239 | 189 | 6.54E-30 | ||
| ProSiteProfiles | 61 | 242 | 182 | 15.462 | ||
| Pfam | 68 | 199 | 132 | 6.4E-15 | ||
| Gene3D | 125 | 255 | 131 | 3.7E-28 | ||
| Pfam | 403 | 533 | 131 | 1.4E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | D-arabinono-1,4-lactone oxidase activity | Catalysis of the reaction: D-arabinono-1,4-lactone + O(2) = dehydro-D-arabinono-1,4-lactone + H(2)O(2) + H(+). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. | ||
| Molecular function | FAD binding | Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. |
Expression pattern of LotjaGi3g1v0054600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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