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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0796300 |
| Transcript ID | LotjaGi1g1v0796300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | L-gulonolactone oxidase; TAIR: AT2G46760.1 D-arabinono-1,4-lactone oxidase family protein; Swiss-Prot: sp|O81032|GGLO6_ARATH Probable L-gulonolactone oxidase 6; TrEMBL-Plants: tr|I1NCQ4|I1NCQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0796300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136712197..136715035) extracted from Lotus japonicus Gifu genome v1.2.
AAACTCACCATTCCAAGTCAAAATAAATGAACCACATGTCACACAGTACGGATACTGATCCTTCCTAGCATCTTCATTTC ACAATTATTGAGTTGAGTACATGACAAAAATCATTTTGCCCTGAAATTAGTAAACCAAAACTACATTCACTTTTAAAATA CCAGACCACTGATCAATGCCATGAACCTTCTCTTGCTCTATACTCAGAGTGAAGTAGAGTTTAACACAGCTTCAGAACGT AATTTAAGCCATGTCTTTACCTTGCTTAAAACGGATGTCACACACTGCAGCCTTCACACACACCCTTCTTCTGTTCCTAC TTTTCAATGTGGGACTCCCTACCCCAGAGGATCCCATCAAATGCTCATCAAACAATAACACAAGCTGCACCATCACAAAC TCCTACGGCATCTTCCCTGATCGAACCACCTGTCACGCAGCACAAGCGTTTTACCCAACTACAGAGCAAGAGCTTCTAAA ACTGGTTGCTTCAGCTTCTCAAAACAAAAGGAGAATGAAAGTTTCAACCCGTTTCTCCCACAGCATCCCCAAGTGGGTGT GTCCTGAGGGCCAAAACGGGTGGGTAATAAGCACCAAGTATCTGAACAGGATATTGGAAATTGATGTGGGAGCGAGGACA ATGAAGGTGCAGAGTGGTGTGACATTGAAGCAGCTAATTGATGAGGCTGCGAAGGTTGAGCTGGCGTTACCGTATGGACC ATATTGGTGGGGCTTGACAATTGGGGGGATAGTTAGTACAGGTGCTCATGGAAGCTCATTGTGGGGGAAAGGAAGTTCAG TGCATGAGCATGTGGTGGAGCTGACAATTGTTAGGCCTGCAGGTCCTGAAGATGGGTATGCTAAGATTCAGAACCTCAGT GAAGATAATGAAGATCTTAATGCAGCAAAACTATCACTTGGCTTGCTGGGGGTCATTTCACAGGTATATACATGTTAGCT CCATTTCTCCTTGTAAATTAGATATGAAAATATTTCTATCTATGATTTCTAGTTAGGTATAGTTACTATAACATCATTTA TGGGCGAACCGATTTTTAACATGATCCACTCTAGAATTGTCTCAATTAAGAAGTGTGTACAACATGGATTTCAATTGTTG AGCTATTTCATTTTGGTTGGGACAAAAGACTATCAAGTTATGCTAAGTACCTATTCACAGATTACTTTGAAACTGGAACC TCTTTTCAAGCGATCCATTACCTATTTGGCAAAAAACGATTTGGATTTGGGAGATCAAGCGGCAGCATTTGGACACCAAC ATGAGTTTGCAGATATAACATGGTACCCAAATCAACATAAGGCTGTGTACCGTGTTGACGATCGTGTCCCAACCAATGCA TCAGGCAGTGGTATCTATGATTTCATCCCTTTCCGTTCCACTTCATCCCTTGAATTGGCACTTATCAGAACCACAGGTTA AGGAGATTATATTTTCACAATCCATTTTCATTTCTTAGAAAACACTTCAAAATGAATTATAATGTTTACCCTTTTTCTTT TGGGCAGAGGATATTCAGGAATTCATTAGTGATGCTGATGGGAAGTGTTTACTTGCAAAGACCGCAACGGATACTCTTGT TGCTGCTGCTTATGGACTAACTAACAATGGTGCTCAATTATTCTTACATACTTTAGTCAATGAGTCACTTTTAGAAGAAT TTTTCTTTTCTGTATATGTTTGTATCAGCTTTTCTTTATCTCAGAATCAATTCTCATGACTCTATGAACATTTTTCAAAA TTGAATTTAGCTTCAGATGTGATCAATCACACAATATGTTTCCAAACATGCTATTAGTTCAATATACAAGAATTTTGATT TCACAAAGCTGAAACATTTGTTTTATGTTTTGAGCTTGCAGGAAAAATCTTCACAGGATTCCCTGTAATTGGATATCAAA ACCACCTTCAGTCTTCTGGGTCATGCCTAGATGGTCCTAAGGATGCAAAGATCACATCATGTCCTTGGGACTTCAGGGTG AAAGGAGAGTTCTTTCACCAAACCACATTTAGCATTGCCTTGTCCGTAGTGAAGAATTTCATTAAAGATGTGCAGAAGCT TGTTGAATTGGAACCGAAGGGATTTTGTGGCATAGAGCTCTACAACGGAATTCTAATGCGTTATGTCAAAGCTTCAAGTG CCTACTTGGGGAAACAAGAAGATGCTATAGACTTTGATATCACATATTACCGTAGCAAAGACCCAATGAGTCCTAGGCTT TACCAAGACATTATTGAAGAGGTTGAGCAATTAGGAATTTTCAAATATGGAGGTCTACCCCATTGGGGTAAGAACAGAAA CATAGCATTTGAAGGAGTAATCAAGAAGTACAAGAATGCAGAGGAATTTTTTAAGGTTAAGAATGTGTATGATTCACAAG GACTATTTTCAAGTGAGTGGGCAGACCAAGTGCTTGGCATAAAAGAAGGGTTAACAACATCACAGGATGGGTGTGCACTA GAAGGTCTTTGCATATGCTCAGATGACAACCATTGTGCACCAAGCAAAGGCTACTTTTGCAGACCTGGTAAAGTGTATAA GGAAGCAAGGGTTTGTTCTTATTTAAGATCTATACAATTCTAACAATCACCCTATATTTGTATTTACTTTATTTGTTCAT GGAAGACCTTCCCATGAATTTTCAGGACTTGGATCCTCTAAGGCTAGACTGCATATCTACACCAACTAATTAAAATGACC TATTATTACAATTACTGAACTTTCTTAACTAAATATCTTTTTACTCACCAATATTCTTAGTCATATGAAACAAATTAAAA TATGAATGGCCAACATATTGCAAGAGAAAGGTTGCACAC
CDS sequence (LotjaGi1g1v0796300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTTACCTTGCTTAAAACGGATGTCACACACTGCAGCCTTCACACACACCCTTCTTCTGTTCCTACTTTTCAATGT GGGACTCCCTACCCCAGAGGATCCCATCAAATGCTCATCAAACAATAACACAAGCTGCACCATCACAAACTCCTACGGCA TCTTCCCTGATCGAACCACCTGTCACGCAGCACAAGCGTTTTACCCAACTACAGAGCAAGAGCTTCTAAAACTGGTTGCT TCAGCTTCTCAAAACAAAAGGAGAATGAAAGTTTCAACCCGTTTCTCCCACAGCATCCCCAAGTGGGTGTGTCCTGAGGG CCAAAACGGGTGGGTAATAAGCACCAAGTATCTGAACAGGATATTGGAAATTGATGTGGGAGCGAGGACAATGAAGGTGC AGAGTGGTGTGACATTGAAGCAGCTAATTGATGAGGCTGCGAAGGTTGAGCTGGCGTTACCGTATGGACCATATTGGTGG GGCTTGACAATTGGGGGGATAGTTAGTACAGGTGCTCATGGAAGCTCATTGTGGGGGAAAGGAAGTTCAGTGCATGAGCA TGTGGTGGAGCTGACAATTGTTAGGCCTGCAGGTCCTGAAGATGGGTATGCTAAGATTCAGAACCTCAGTGAAGATAATG AAGATCTTAATGCAGCAAAACTATCACTTGGCTTGCTGGGGGTCATTTCACAGATTACTTTGAAACTGGAACCTCTTTTC AAGCGATCCATTACCTATTTGGCAAAAAACGATTTGGATTTGGGAGATCAAGCGGCAGCATTTGGACACCAACATGAGTT TGCAGATATAACATGGTACCCAAATCAACATAAGGCTGTGTACCGTGTTGACGATCGTGTCCCAACCAATGCATCAGGCA GTGGTATCTATGATTTCATCCCTTTCCGTTCCACTTCATCCCTTGAATTGGCACTTATCAGAACCACAGAGGATATTCAG GAATTCATTAGTGATGCTGATGGGAAGTGTTTACTTGCAAAGACCGCAACGGATACTCTTGTTGCTGCTGCTTATGGACT AACTAACAATGGAAAAATCTTCACAGGATTCCCTGTAATTGGATATCAAAACCACCTTCAGTCTTCTGGGTCATGCCTAG ATGGTCCTAAGGATGCAAAGATCACATCATGTCCTTGGGACTTCAGGGTGAAAGGAGAGTTCTTTCACCAAACCACATTT AGCATTGCCTTGTCCGTAGTGAAGAATTTCATTAAAGATGTGCAGAAGCTTGTTGAATTGGAACCGAAGGGATTTTGTGG CATAGAGCTCTACAACGGAATTCTAATGCGTTATGTCAAAGCTTCAAGTGCCTACTTGGGGAAACAAGAAGATGCTATAG ACTTTGATATCACATATTACCGTAGCAAAGACCCAATGAGTCCTAGGCTTTACCAAGACATTATTGAAGAGGTTGAGCAA TTAGGAATTTTCAAATATGGAGGTCTACCCCATTGGGGTAAGAACAGAAACATAGCATTTGAAGGAGTAATCAAGAAGTA CAAGAATGCAGAGGAATTTTTTAAGGTTAAGAATGTGTATGATTCACAAGGACTATTTTCAAGTGAGTGGGCAGACCAAG TGCTTGGCATAAAAGAAGGGTTAACAACATCACAGGATGGGTGTGCACTAGAAGGTCTTTGCATATGCTCAGATGACAAC CATTGTGCACCAAGCAAAGGCTACTTTTGCAGACCTGGTAAAGTGTATAAGGAAGCAAGGGTTTGTTCTTATTTAAGATC TATACAATTCTAA
Protein sequence (LotjaGi1g1v0796300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLPCLKRMSHTAAFTHTLLLFLLFNVGLPTPEDPIKCSSNNNTSCTITNSYGIFPDRTTCHAAQAFYPTTEQELLKLVA SASQNKRRMKVSTRFSHSIPKWVCPEGQNGWVISTKYLNRILEIDVGARTMKVQSGVTLKQLIDEAAKVELALPYGPYWW GLTIGGIVSTGAHGSSLWGKGSSVHEHVVELTIVRPAGPEDGYAKIQNLSEDNEDLNAAKLSLGLLGVISQITLKLEPLF KRSITYLAKNDLDLGDQAAAFGHQHEFADITWYPNQHKAVYRVDDRVPTNASGSGIYDFIPFRSTSSLELALIRTTEDIQ EFISDADGKCLLAKTATDTLVAAAYGLTNNGKIFTGFPVIGYQNHLQSSGSCLDGPKDAKITSCPWDFRVKGEFFHQTTF SIALSVVKNFIKDVQKLVELEPKGFCGIELYNGILMRYVKASSAYLGKQEDAIDFDITYYRSKDPMSPRLYQDIIEEVEQ LGIFKYGGLPHWGKNRNIAFEGVIKKYKNAEEFFKVKNVYDSQGLFSSEWADQVLGIKEGLTTSQDGCALEGLCICSDDN HCAPSKGYFCRPGKVYKEARVCSYLRSIQF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 30 | 30 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 38 | 38 | - | – | |
| Phobius | 1 | 12 | 12 | - | – | |
| Phobius | 1 | 30 | 30 | - | – | |
| PANTHER | 6 | 585 | 580 | 0.0 | – | |
| PANTHER | 6 | 585 | 580 | 0.0 | – | |
| Phobius | 13 | 25 | 13 | - | – | |
| Phobius | 26 | 30 | 5 | - | – | |
| Phobius | 31 | 590 | 560 | - | – | |
| TIGRFAM | 32 | 582 | 551 | 1.6E-264 | ||
| SUPERFAMILY | 56 | 238 | 183 | 2.62E-35 | ||
| ProSiteProfiles | 59 | 239 | 181 | 20.91 | ||
| Pfam | 65 | 198 | 134 | 4.6E-18 | ||
| Gene3D | 121 | 251 | 131 | 2.3E-35 | ||
| Pfam | 396 | 533 | 138 | 1.7E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | D-arabinono-1,4-lactone oxidase activity | Catalysis of the reaction: D-arabinono-1,4-lactone + O(2) = dehydro-D-arabinono-1,4-lactone + H(2)O(2) + H(+). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. | ||
| Molecular function | FAD binding | Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. |
Expression pattern of LotjaGi1g1v0796300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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