Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

cd03480

Source: CDD

Description

Rieske_RO_Alpha_PaO

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v3032090.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Cicer arietinum] gi\|502145563\|ref\|XP_004506081.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.102.10.10 IPR013626 IPR017941 NON_CYTOPLASMIC_DOMAIN PF00355 PF08417 PS51296 PTHR21266 PTHR21266:SF24 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50022 SSF55961 SignalP-TM_GRAM_POSITIVE TRANSMEMBRANE cd03480 mobidb-lite	20
LotjaGi3g1v0484200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pheophorbide a oxygenase, chloroplastic; TAIR: AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein; Swiss-Prot: sp\|Q9FYC2\|PAO_ARATH Pheophorbide a oxygenase, chloroplastic; TrEMBL-Plants: tr\|I1LKY8\|I1LKY8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0484200	Domains CYTOPLASMIC_DOMAIN G3DSA:2.102.10.10 IPR013626 IPR017941 IPR036922 NON_CYTOPLASMIC_DOMAIN PF00355 PF08417 PS51296 PTHR21266 PTHR21266:SF24 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50022 SSF55961 SignalP-TM TRANSMEMBRANE cd03480 mobidb-lite	21
LotjaGi4g1v0375900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pheophorbide a oxygenase, chloroplastic; TAIR: AT4G25650.1 ACD1-like protein; Swiss-Prot: sp\|Q8W496\|PTC52_ARATH Protochlorophyllide-dependent translocon component 52, chloroplastic; TrEMBL-Plants: tr\|G7LIM7\|G7LIM7_MEDTR Chlorophyllide A oxygenase; Found in the gene: LotjaGi4g1v0375900	Domains CYTOPLASMIC_DOMAIN G3DSA:2.102.10.10 G3DSA:3.30.530.90 IPR013626 IPR017941 IPR036922 NON_CYTOPLASMIC_DOMAIN PF00355 PF08417 PS51296 PTHR21266 PTHR21266:SF49 SSF50022 SSF55961 TRANSMEMBRANE cd03480	16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd03480	CDD	1	33.33