Domain Predictions — View

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cd06173

Source: CDD

Description

MFS_MefA_like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi3g1v0425500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane 9 superfamily member; TAIR: AT3G13772.1 transmembrane nine 7; Swiss-Prot: sp\|Q9LIC2\|TMN7_ARATH Transmembrane 9 superfamily member 7; TrEMBL-Plants: tr\|A0A072TLT0\|A0A072TLT0_MEDTR Transmembrane 9 superfamily member; Found in the gene: LotjaGi3g1v0425500	Domains CYTOPLASMIC_DOMAIN IPR004240 IPR036259 NON_CYTOPLASMIC_DOMAIN PF02990 PTHR10766 PTHR10766:SF106 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF103473 SignalP-noTM TMhelix TRANSMEMBRANE cd06173	16
LotjaGi3g1v0425500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane 9 superfamily member; TAIR: AT3G13772.1 transmembrane nine 7; Swiss-Prot: sp\|Q9LIC2\|TMN7_ARATH Transmembrane 9 superfamily member 7; TrEMBL-Plants: tr\|I1KGC3\|I1KGC3_SOYBN Transmembrane 9 superfamily member; Found in the gene: LotjaGi3g1v0425500	Domains CYTOPLASMIC_DOMAIN IPR004240 IPR036259 NON_CYTOPLASMIC_DOMAIN PF02990 PTHR10766 PTHR10766:SF106 SSF103473 TMhelix TRANSMEMBRANE cd06173	11
LotjaGi3g1v0425500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane 9 superfamily member; TAIR: AT3G13772.1 transmembrane nine 7; Swiss-Prot: sp\|Q9LIC2\|TMN7_ARATH Transmembrane 9 superfamily member 7; TrEMBL-Plants: tr\|A0A072TLT0\|A0A072TLT0_MEDTR Transmembrane 9 superfamily member; Found in the gene: LotjaGi3g1v0425500	Domains CYTOPLASMIC_DOMAIN IPR004240 IPR036259 NON_CYTOPLASMIC_DOMAIN PF02990 PTHR10766 PTHR10766:SF106 SSF103473 TMhelix TRANSMEMBRANE cd06173	11
LotjaGi3g1v0425500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane 9 superfamily member; TAIR: AT3G13772.1 transmembrane nine 7; Swiss-Prot: sp\|Q9LIC2\|TMN7_ARATH Transmembrane 9 superfamily member 7; TrEMBL-Plants: tr\|I1KGC3\|I1KGC3_SOYBN Transmembrane 9 superfamily member; Found in the gene: LotjaGi3g1v0425500	Domains CYTOPLASMIC_DOMAIN IPR004240 IPR036259 NON_CYTOPLASMIC_DOMAIN PF02990 PTHR10766 PTHR10766:SF106 SSF103473 TMhelix TRANSMEMBRANE cd06173	11
LotjaGi3g1v0425500.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane 9 superfamily member; TAIR: AT3G13772.1 transmembrane nine 7; Swiss-Prot: sp\|Q9LIC2\|TMN7_ARATH Transmembrane 9 superfamily member 7; TrEMBL-Plants: tr\|I1KGC3\|I1KGC3_SOYBN Transmembrane 9 superfamily member; Found in the gene: LotjaGi3g1v0425500	Domains CYTOPLASMIC_DOMAIN IPR004240 IPR036259 NON_CYTOPLASMIC_DOMAIN PF02990 PTHR10766 PTHR10766:SF106 SSF103473 TMhelix TRANSMEMBRANE cd06173	11
LotjaGi6g1v0053500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Voltage-dependent L-type calcium channel subunit; TAIR: AT5G16550.1 voltage-dependent L-type calcium channel subunit; Swiss-Prot: sp\|Q8K449\|ABCA9_MOUSE ATP-binding cassette sub-family A member 9; TrEMBL-Plants: tr\|A0A0B2PMM8\|A0A0B2PMM8_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0053500	Domains CYTOPLASMIC_DOMAIN IPR036259 NON_CYTOPLASMIC_DOMAIN PTHR35508 SSF103473 SignalP-noTM TMhelix TRANSMEMBRANE cd06173 mobidb-lite	10
LotjaGi6g1v0053500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Voltage-dependent L-type calcium channel subunit; TAIR: AT5G16550.1 voltage-dependent L-type calcium channel subunit; Swiss-Prot: sp\|Q8K449\|ABCA9_MOUSE ATP-binding cassette sub-family A member 9; TrEMBL-Plants: tr\|A0A0B2PMM8\|A0A0B2PMM8_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0053500	Domains CYTOPLASMIC_DOMAIN IPR036259 NON_CYTOPLASMIC_DOMAIN PTHR35508 SSF103473 SignalP-noTM TMhelix TRANSMEMBRANE cd06173 mobidb-lite	10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29