Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

cd06466

Source: CDD

Description

p23_CS_SGT1_like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v2061250.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein SGT1 homolog [Cicer arietinum] gi\|502159855\|ref\|XP_004511553.1\|	Domains G3DSA:1.25.40.10 G3DSA:2.60.40.790 IPR007052 IPR007699 IPR008978 IPR011990 IPR013026 IPR019734 PF04969 PF05002 PF13181 PS50005 PS50293 PS51048 PS51203 PTHR22904 PTHR22904:SF344 SM00028 SSF48452 SSF49764 cd06466 mobidb-lite	22
Lj2g3v2061250.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein SGT1 homolog [Cicer arietinum] gi\|502159855\|ref\|XP_004511553.1\|	Domains G3DSA:1.25.40.10 G3DSA:2.60.40.790 IPR007052 IPR007699 IPR008978 IPR011990 IPR013026 IPR019734 PF04969 PF05002 PF13181 PS50005 PS50293 PS51048 PS51203 PTHR22904 PTHR22904:SF344 SM00028 SSF48452 SSF49764 cd06466 mobidb-lite	22
LotjaGi2g1v0138700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein SGT1; TAIR: AT4G11260.1 phosphatase-like protein; Swiss-Prot: sp\|Q9SUT5\|SGT1B_ARATH Protein SGT1 homolog B; TrEMBL-Plants: tr\|I3SS23\|I3SS23_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0138700	Domains G3DSA:1.25.40.10 G3DSA:2.60.40.790 IPR007052 IPR007699 IPR008978 IPR011990 IPR013026 IPR019734 PF04969 PF05002 PF13181 PS50005 PS50293 PS51048 PS51203 PTHR45862 PTHR45862:SF2 SM00028 SSF48452 SSF49764 cd06466	21
LotjaGi2g1v0436700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SGT1; TAIR: AT4G11260.1 phosphatase-like protein; Swiss-Prot: sp\|Q9SUT5\|SGT1B_ARATH Protein SGT1 homolog B; TrEMBL-Plants: tr\|A0A1J7H3E0\|A0A1J7H3E0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436700	Domains G3DSA:1.25.40.10 G3DSA:2.60.40.790 IPR007052 IPR007699 IPR008978 IPR011990 IPR013026 IPR019734 PF04969 PF05002 PF13181 PS50005 PS50293 PS51048 PS51203 PTHR45862 PTHR45862:SF2 SM00028 SSF48452 SSF49764 cd06466 mobidb-lite	22
LotjaGi2g1v0436700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	SGT1; TAIR: AT4G11260.1 phosphatase-like protein; Swiss-Prot: sp\|Q9SUT5\|SGT1B_ARATH Protein SGT1 homolog B; TrEMBL-Plants: tr\|A0A1J7H3E0\|A0A1J7H3E0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0436700	Domains G3DSA:1.25.40.10 G3DSA:2.60.40.790 IPR007052 IPR007699 IPR008978 IPR011990 IPR013026 IPR019734 PF04969 PF05002 PF13181 PS50005 PS50293 PS51048 PS51203 PTHR45862 PTHR45862:SF2 SM00028 SSF48452 SSF49764 cd06466 mobidb-lite	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00