Domain Predictions — View

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cd06921

Source: CDD

Description

ChtBD1_GH19_hevein

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0213179.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: endochitinase-like [Cicer arietinum] gi\|502153653\|ref\|XP_004509418.1\|	Domains G3DSA:1.10.530.10 G3DSA:3.30.60.10 IPR000726 IPR001002 IPR016283 IPR018371 IPR023346 NON_CYTOPLASMIC_DOMAIN PD000609 PF00182 PF00187 PIRSF001060 PR00451 PS00026 PS00773 PS00774 PS50941 PTHR22595 PTHR22595:SF34 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00270 SSF53955 SSF57016 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE cd00325 cd06921	31
Lj0g3v0247049.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Class Ia chitinase [Galega orientalis] gi\|33414052\|gb\|AAP03088.1\|	Domains G3DSA:1.10.530.10 G3DSA:3.30.20.10 G3DSA:3.30.60.10 IPR000726 IPR001002 IPR016283 IPR018371 IPR023346 NON_CYTOPLASMIC_DOMAIN PD000609 PF00182 PF00187 PIRSF001060 PR00451 PS00026 PS00773 PS00774 PS50941 PTHR22595 PTHR22595:SF34 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00270 SSF53955 SSF57016 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE cd00325 cd06921	32
Lj1g3v3330050.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Class Ia chitinase [Galega orientalis] gi\|33414052\|gb\|AAP03088.1\|	Domains G3DSA:1.10.530.10 G3DSA:3.30.20.10 G3DSA:3.30.60.10 IPR000726 IPR001002 IPR016283 IPR018371 IPR023346 NON_CYTOPLASMIC_DOMAIN PD000609 PF00182 PF00187 PIRSF001060 PR00451 PS00026 PS00773 PS50941 PTHR22595 PTHR22595:SF34 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00270 SSF53955 SSF57016 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK cd00325 cd06921	30
LotjaGi1g1v0556300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chitinase; TAIR: AT3G12500.1 basic chitinase; Swiss-Prot: sp\|P06215\|CHIT_PHAVU Endochitinase; TrEMBL-Plants: tr\|G7J999\|G7J999_MEDTR Chitinase (Class I) / Hevein; Found in the gene: LotjaGi1g1v0556300	Domains G3DSA:1.10.530.10 G3DSA:3.30.20.10 G3DSA:3.30.60.10 IPR000726 IPR001002 IPR016283 IPR018371 IPR023346 IPR036861 NON_CYTOPLASMIC_DOMAIN PF00182 PF00187 PIRSF001060 PR00451 PS00026 PS00773 PS00774 PS50941 PTHR22595 PTHR22595:SF137 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00270 SSF53955 SSF57016 SignalP-noTM cd00325 cd06921	30
LotjaGi2g1v0287300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chitinase; TAIR: AT3G12500.1 basic chitinase; Swiss-Prot: sp\|P06215\|CHIT_PHAVU Endochitinase; TrEMBL-Plants: tr\|Q7X9F5\|Q7X9F5_9FABA Class Ia chitinase; Found in the gene: LotjaGi2g1v0287300	Domains G3DSA:1.10.530.10 G3DSA:3.30.20.10 G3DSA:3.30.60.10 IPR000726 IPR001002 IPR016283 IPR018371 IPR023346 IPR036861 NON_CYTOPLASMIC_DOMAIN PF00182 PF00187 PIRSF001060 PR00451 PS00026 PS00773 PS00774 PS50941 PTHR22595 PTHR22595:SF123 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00270 SSF53955 SSF57016 SignalP-TM SignalP-noTM cd00325 cd06921	31
LotjaGi4g1v0137500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chitinase; TAIR: AT3G12500.1 basic chitinase; Swiss-Prot: sp\|P36907\|CHIX_PEA Endochitinase; TrEMBL-Plants: tr\|I3RZQ4\|I3RZQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0137500	Domains G3DSA:1.10.530.10 G3DSA:3.30.20.10 G3DSA:3.30.60.10 IPR000726 IPR001002 IPR016283 IPR018371 IPR023346 IPR036861 NON_CYTOPLASMIC_DOMAIN PF00182 PF00187 PIRSF001060 PR00451 PS00026 PS00773 PS00774 PS50941 PTHR22595 PTHR22595:SF123 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00270 SSF53955 SSF57016 SignalP-TM SignalP-noTM cd00325 cd06921	31

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd06921	CDD	1	16.67