Domain Predictions — View

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cd13648

Source: CDD

Description

PBP2_PBGD_1

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v2099820.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Porphobilinogen deaminase [Medicago truncatula] gi\|357474093\|ref\|XP_003607331.1\|	Domains G3DSA:3.30.160.40 G3DSA:3.40.190.10 IPR000860 IPR022417 IPR022418 IPR022419 MF_00260 PF01379 PF03900 PIRSF001438 PR00151 PS00533 PTHR11557 SSF53850 SSF54782 TIGR00212 cd13648	17
Lj4g3v2313680.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: porphobilinogen deaminase, chloroplastic-like [Glycine max] gi\|356538495\|ref\|XP_003537739.1\|	Domains G3DSA:3.30.160.40 G3DSA:3.40.190.10 IPR000860 IPR022417 IPR022418 IPR022419 MF_00260 NON_CYTOPLASMIC_DOMAIN PF01379 PF03900 PIRSF001438 PR00151 PS00533 PTHR11557 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53850 SSF54782 TIGR00212 cd13648	22
LotjaGi2g1v0443900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Porphobilinogen deaminase; TAIR: AT5G08280.1 hydroxymethylbilane synthase; Swiss-Prot: sp\|Q43082\|HEM3_PEA Porphobilinogen deaminase, chloroplastic; TrEMBL-Plants: tr\|A0A151SCZ0\|A0A151SCZ0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0443900	Domains G3DSA:3.30.160.40 G3DSA:3.40.190.10 IPR000860 IPR022417 IPR022418 IPR022419 IPR036803 MF_00260 PF01379 PF03900 PIRSF001438 PR00151 PS00533 PTHR11557 PTHR11557:SF0 SSF53850 SSF54782 TIGR00212 cd13648	19
LotjaGi4g1v0340300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Porphobilinogen deaminase, putative; TAIR: AT5G08280.1 hydroxymethylbilane synthase; Swiss-Prot: sp\|Q43082\|HEM3_PEA Porphobilinogen deaminase, chloroplastic; TrEMBL-Plants: tr\|A0A151SCZ0\|A0A151SCZ0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0340300	Domains G3DSA:3.30.160.40 G3DSA:3.40.190.10 IPR000860 IPR022417 IPR022418 IPR022419 IPR036803 MF_00260 PF01379 PF03900 PIRSF001438 PR00151 PS00533 PTHR11557 PTHR11557:SF0 SSF53850 SSF54782 TIGR00212 cd13648	19
LotjaGi4g1v0340300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Porphobilinogen deaminase, putative; TAIR: AT5G08280.1 hydroxymethylbilane synthase; Swiss-Prot: sp\|Q43082\|HEM3_PEA Porphobilinogen deaminase, chloroplastic; TrEMBL-Plants: tr\|A0A151SCZ0\|A0A151SCZ0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0340300	Domains G3DSA:3.30.160.40 G3DSA:3.40.190.10 IPR000860 IPR022417 IPR022418 IPR022419 IPR036803 PF01379 PF03900 PIRSF001438 PR00151 PS00533 PTHR11557 PTHR11557:SF0 SSF53850 SSF54782 TIGR00212 cd13648	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd13648	CDD	1	20.00