Domain Predictions — View

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cd14399

Source: CDD

Description

UBA_PLICs

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0338909.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ubiquilin-1-like [Glycine max] gi\|356501749\|ref\|XP_003519686.1\|	Domains G3DSA:1.10.8.10 G3DSA:3.10.20.90 IPR000626 IPR006636 IPR009060 IPR015496 IPR015940 IPR029071 PF00240 PF00627 PS50030 PS50053 PTHR10677 PTHR10677:SF22 SM00165 SM00213 SM00727 SSF46934 SSF54236 cd14399 mobidb-lite	21
Lj2g3v1644370.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ubiquilin-like [Cicer arietinum] gi\|502161708\|ref\|XP_004512257.1\|	Domains G3DSA:1.10.8.10 IPR006636 IPR009060 IPR015496 IPR015940 PF00627 PS50030 PTHR10677 PTHR10677:SF22 SM00165 SM00727 SSF46934 cd14399 mobidb-lite	14
LotjaGi2g1v0355900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin-like protein; TAIR: AT2G17200.1 ubiquitin family protein; Swiss-Prot: sp\|Q9SII8\|DSK2B_ARATH Ubiquitin domain-containing protein DSK2b; TrEMBL-Plants: tr\|A0A151THR2\|A0A151THR2_CAJCA Ubiquilin-1; Found in the gene: LotjaGi2g1v0355900	Domains G3DSA:1.10.8.10 G3DSA:3.10.20.90 IPR000626 IPR006636 IPR009060 IPR015496 IPR015940 IPR019954 IPR019956 IPR029071 PF00240 PF00627 PR00348 PS00299 PS50030 PS50053 PTHR10677 PTHR10677:SF46 SM00165 SM00213 SM00727 SSF46934 SSF54236 cd14399 cd16106 mobidb-lite	26
LotjaGi4g1v0136800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin-like protein; TAIR: AT2G17200.1 ubiquitin family protein; Swiss-Prot: sp\|Q9SII8\|DSK2B_ARATH Ubiquitin domain-containing protein DSK2b; TrEMBL-Plants: tr\|A0A0S3R3T1\|A0A0S3R3T1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0136800	Domains G3DSA:1.10.8.10 G3DSA:3.10.20.90 IPR000626 IPR006636 IPR009060 IPR015496 IPR015940 IPR029071 PF00240 PF00627 PS50030 PS50053 PTHR10677 PTHR10677:SF42 SM00165 SM00213 SM00727 SSF46934 SSF54236 cd14399 cd16106 mobidb-lite	22
LotjaGi4g1v0136800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ubiquitin-like protein; TAIR: AT2G17200.1 ubiquitin family protein; Swiss-Prot: sp\|Q9SII8\|DSK2B_ARATH Ubiquitin domain-containing protein DSK2b; TrEMBL-Plants: tr\|A0A0S3R3T1\|A0A0S3R3T1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0136800	Domains G3DSA:1.10.8.10 G3DSA:3.10.20.90 IPR000626 IPR006636 IPR009060 IPR015496 IPR015940 IPR029071 PF00240 PF00627 PS50030 PS50053 PTHR10677 PTHR10677:SF46 SM00165 SM00213 SM00727 SSF46934 SSF54236 cd14399 cd16106 mobidb-lite	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00