Domain Predictions — View

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cd16260

Source: CDD

Description

EF4_III

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0327700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 4; TAIR: AT5G08650.1 Small GTP-binding protein; Swiss-Prot: sp\|A5B4D2\|GUFP_VITVI Translation factor GUF1 homolog, chloroplastic; TrEMBL-Plants: tr\|A0A0S3REW3\|A0A0S3REW3_PHAAN Translation factor GUF1 homolog, chloroplastic; Found in the gene: LotjaGi1g1v0327700	Domains G3DSA:2.40.30.10 G3DSA:3.30.70.2570 G3DSA:3.30.70.3380 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR005225 IPR006297 IPR009000 IPR013842 IPR027417 IPR031157 IPR035647 IPR035654 IPR038363 MF_00071 PF00009 PF00679 PF03144 PF06421 PR00315 PS00301 PS51722 PTHR43512 PTHR43512:SF1 SM00838 SSF50447 SSF52540 SSF54980 TIGR00231 TIGR01393 cd01890 cd03699 cd03709 cd16260	37
LotjaGi1g1v0500000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 4; TAIR: AT5G39900.1 Small GTP-binding protein; Swiss-Prot: sp\|B9RUN8\|GUF1_RICCO Translation factor GUF1 homolog, mitochondrial; TrEMBL-Plants: tr\|A0A151TAY4\|A0A151TAY4_CAJCA Translation factor GUF1 homolog, mitochondrial; Found in the gene: LotjaGi1g1v0500000	Domains G3DSA:2.40.30.10 G3DSA:3.30.70.2570 G3DSA:3.30.70.3380 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR005225 IPR006297 IPR009000 IPR013842 IPR027417 IPR031157 IPR035647 IPR035654 IPR038363 MF_00071 PF00009 PF00679 PF03144 PF06421 PR00315 PS00301 PS51722 PTHR43512 PTHR43512:SF3 SSF50447 SSF52540 SSF54980 TIGR00231 TIGR01393 cd01890 cd03699 cd03709 cd16260	36
LotjaGi1g1v0500000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 4; TAIR: AT5G39900.1 Small GTP-binding protein; Swiss-Prot: sp\|B9RUN8\|GUF1_RICCO Translation factor GUF1 homolog, mitochondrial; TrEMBL-Plants: tr\|A0A151TAY4\|A0A151TAY4_CAJCA Translation factor GUF1 homolog, mitochondrial; Found in the gene: LotjaGi1g1v0500000	Domains G3DSA:2.40.30.10 G3DSA:3.30.70.3380 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000795 IPR004161 IPR005225 IPR006297 IPR009000 IPR027417 IPR031157 IPR035647 MF_00071 PF00009 PF03144 PR00315 PS00301 PS51722 PTHR43512 PTHR43512:SF3 SSF50447 SSF52540 SSF54980 TIGR00231 TIGR01393 cd01890 cd03699 cd16260	28
LotjaGi1g1v0500000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 4; TAIR: AT5G39900.1 Small GTP-binding protein; Swiss-Prot: sp\|B9RUN8\|GUF1_RICCO Translation factor GUF1 homolog, mitochondrial; TrEMBL-Plants: tr\|A0A151TAY4\|A0A151TAY4_CAJCA Translation factor GUF1 homolog, mitochondrial; Found in the gene: LotjaGi1g1v0500000	Domains G3DSA:2.40.30.10 G3DSA:3.30.70.2570 G3DSA:3.30.70.3380 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR005225 IPR006297 IPR009000 IPR013842 IPR027417 IPR031157 IPR035647 IPR035654 IPR038363 MF_00071 PF00009 PF00679 PF03144 PF06421 PR00315 PS00301 PS51722 PTHR43512 PTHR43512:SF3 SSF50447 SSF52540 SSF54980 TIGR00231 TIGR01393 cd01890 cd03699 cd03709 cd16260	36
LotjaGi1g1v0500000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 4; TAIR: AT5G39900.1 Small GTP-binding protein; Swiss-Prot: sp\|B9RUN8\|GUF1_RICCO Translation factor GUF1 homolog, mitochondrial; TrEMBL-Plants: tr\|A0A151TAY4\|A0A151TAY4_CAJCA Translation factor GUF1 homolog, mitochondrial; Found in the gene: LotjaGi1g1v0500000	Domains G3DSA:2.40.30.10 G3DSA:3.30.70.2570 G3DSA:3.30.70.3380 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR005225 IPR006297 IPR009000 IPR013842 IPR027417 IPR031157 IPR035647 IPR035654 IPR038363 MF_00071 PF00009 PF00679 PF03144 PF06421 PR00315 PS00301 PS51722 PTHR43512 PTHR43512:SF3 SSF50447 SSF52540 SSF54980 TIGR00231 TIGR01393 cd01890 cd03699 cd03709 cd16260	36
LotjaGi1g1v0500000.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 4; TAIR: AT5G39900.1 Small GTP-binding protein; Swiss-Prot: sp\|B9RUN8\|GUF1_RICCO Translation factor GUF1 homolog, mitochondrial; TrEMBL-Plants: tr\|A0A151TAY4\|A0A151TAY4_CAJCA Translation factor GUF1 homolog, mitochondrial; Found in the gene: LotjaGi1g1v0500000	Domains G3DSA:2.40.30.10 G3DSA:3.30.70.2570 G3DSA:3.30.70.3380 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR005225 IPR006297 IPR009000 IPR013842 IPR027417 IPR031157 IPR035647 IPR035654 IPR038363 MF_00071 PF00009 PF00679 PF03144 PF06421 PR00315 PS00301 PS51722 PTHR43512 PTHR43512:SF3 SSF50447 SSF52540 SSF54980 TIGR00231 TIGR01393 cd01890 cd03699 cd03709 cd16260	36

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd16260	CDD	1	16.67