Domain Predictions — View

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cd16521

Source: CDD

Description

RING-HC_MKRN

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi3g1v0123400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Makorin RING-zinc-finger protein; TAIR: AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp\|E0X9N4\|C3H69_ARATH Putative RING-type E3 ubiquitin transferase C3H69; TrEMBL-Plants: tr\|G7IWL8\|G7IWL8_MEDTR Makorin RING-zinc-finger protein; Found in the gene: LotjaGi3g1v0123400	Domains G3DSA:3.30.40.10 G3DSA:4.10.1000.10 IPR000571 IPR001841 IPR013083 IPR017907 IPR018957 IPR036855 IPR041367 PF00097 PF18044 PS00518 PS50089 PS50103 PTHR11224 PTHR11224:SF41 SM00184 SM00356 SSF57850 SSF90229 cd16521	21
LotjaGi3g1v0123400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Makorin RING-zinc-finger protein; TAIR: AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp\|E0X9N4\|C3H69_ARATH Putative RING-type E3 ubiquitin transferase C3H69; TrEMBL-Plants: tr\|G7IWL8\|G7IWL8_MEDTR Makorin RING-zinc-finger protein; Found in the gene: LotjaGi3g1v0123400	Domains G3DSA:3.30.40.10 G3DSA:4.10.1000.10 IPR000571 IPR001841 IPR013083 IPR017907 IPR018957 IPR036855 IPR041367 PF00097 PF18044 PS00518 PS50089 PS50103 PTHR11224 PTHR11224:SF43 SM00184 SM00356 SSF57850 SSF90229 cd16521	21
LotjaGi3g1v0123400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Makorin RING-zinc-finger protein; TAIR: AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp\|E0X9N4\|C3H69_ARATH Putative RING-type E3 ubiquitin transferase C3H69; TrEMBL-Plants: tr\|G7IWL8\|G7IWL8_MEDTR Makorin RING-zinc-finger protein; Found in the gene: LotjaGi3g1v0123400	Domains G3DSA:3.30.40.10 G3DSA:4.10.1000.10 IPR000571 IPR001841 IPR013083 IPR017907 IPR018957 IPR036855 IPR041367 PF00097 PF18044 PS00518 PS50089 PS50103 PTHR11224 PTHR11224:SF43 SM00184 SM00356 SSF57850 SSF90229 cd16521	21
LotjaGi3g1v0123400.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Makorin RING-zinc-finger protein; TAIR: AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp\|E0X9N4\|C3H69_ARATH Putative RING-type E3 ubiquitin transferase C3H69; TrEMBL-Plants: tr\|G7IWL8\|G7IWL8_MEDTR Makorin RING-zinc-finger protein; Found in the gene: LotjaGi3g1v0123400	Domains G3DSA:3.30.40.10 G3DSA:4.10.1000.10 IPR000571 IPR001841 IPR013083 IPR017907 IPR018957 IPR036855 IPR041367 PF00097 PF18044 PS00518 PS50089 PS50103 PTHR11224 PTHR11224:SF43 SM00184 SM00356 SSF57850 SSF90229 cd16521	21
LotjaGi3g1v0123500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Makorin RING-zinc-finger protein; TAIR: AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp\|E0X9N4\|C3H69_ARATH Putative RING-type E3 ubiquitin transferase C3H69; TrEMBL-Plants: tr\|I1MJM7\|I1MJM7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0123500	Domains G3DSA:3.30.40.10 G3DSA:4.10.1000.10 IPR000571 IPR001841 IPR013083 IPR017907 IPR018957 IPR036855 PF00097 PF00642 PS00518 PS50089 PS50103 PTHR11224 PTHR11224:SF43 SM00184 SM00356 SSF57850 SSF90229 cd16521 mobidb-lite	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00