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IPR041367

Source: InterPro

Description

IPR041367 is a E3 ligase, CCCH-type zinc finger.

<p>This short zinc binding domain has the pattern of three cysteines and one histidine to coordinate the zinc ion. This domain is found in a wide variety of proteins such as E3 ligases.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 14

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0317800_LC.1
– Zinc finger CCCH domain protein; TAIR: AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9LIH5|C3H38_ARATH Zinc finger CCCH domain-containing protein 38; TrEMBL-Plants: tr|A0A1J7GN09|A0A1J7GN09_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317800_LC
Domains
12
LotjaGi1g1v0317800_LC.2
– Zinc finger CCCH domain protein; TAIR: AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9LIH5|C3H38_ARATH Zinc finger CCCH domain-containing protein 38; TrEMBL-Plants: tr|A0A1J7GN09|A0A1J7GN09_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317800_LC
Domains
12
LotjaGi1g1v0317800_LC.3
– Zinc finger CCCH domain protein; TAIR: AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9LIH5|C3H38_ARATH Zinc finger CCCH domain-containing protein 38; TrEMBL-Plants: tr|A0A1J7GN09|A0A1J7GN09_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317800_LC
Domains
12
LotjaGi2g1v0151000.1
– Zinc finger WD40 repeat protein 1; TAIR: AT4G25440.1 zinc finger WD40 repeat protein 1; Swiss-Prot: sp|Q9FNZ2|C3H48_ARATH Zinc finger CCCH domain-containing protein 48; TrEMBL-Plants: tr|A0A1J7GXB3|A0A1J7GXB3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0151000
Domains
25
LotjaGi3g1v0122600.1
– Zinc finger CCCH domain-containing protein; TAIR: AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein; Swiss-Prot: sp|P93755|C3H30_ARATH Zinc finger CCCH domain-containing protein 30; TrEMBL-Plants: tr|I1MJP7|I1MJP7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0122600
Domains
18
LotjaGi3g1v0123400.1
– Makorin RING-zinc-finger protein; TAIR: AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp|E0X9N4|C3H69_ARATH Putative RING-type E3 ubiquitin transferase C3H69; TrEMBL-Plants: tr|G7IWL8|G7IWL8_MEDTR Makorin RING-zinc-finger protein; Found in the gene: LotjaGi3g1v0123400
Domains
21
LotjaGi3g1v0123400.2
– Makorin RING-zinc-finger protein; TAIR: AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp|E0X9N4|C3H69_ARATH Putative RING-type E3 ubiquitin transferase C3H69; TrEMBL-Plants: tr|G7IWL8|G7IWL8_MEDTR Makorin RING-zinc-finger protein; Found in the gene: LotjaGi3g1v0123400
Domains
21
LotjaGi3g1v0123400.3
– Makorin RING-zinc-finger protein; TAIR: AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp|E0X9N4|C3H69_ARATH Putative RING-type E3 ubiquitin transferase C3H69; TrEMBL-Plants: tr|G7IWL8|G7IWL8_MEDTR Makorin RING-zinc-finger protein; Found in the gene: LotjaGi3g1v0123400
Domains
21
LotjaGi3g1v0123400.4
– Makorin RING-zinc-finger protein; TAIR: AT3G08505.1 zinc finger (CCCH-type/C3HC4-type RING finger) family protein; Swiss-Prot: sp|E0X9N4|C3H69_ARATH Putative RING-type E3 ubiquitin transferase C3H69; TrEMBL-Plants: tr|G7IWL8|G7IWL8_MEDTR Makorin RING-zinc-finger protein; Found in the gene: LotjaGi3g1v0123400
Domains
21
LotjaGi3g1v0411300.1
– Zinc finger CCCH domain protein, putative; TAIR: AT5G66840.1 SAP domain-containing protein; Swiss-Prot: sp|Q338N2|C3H62_ORYSJ Zinc finger CCCH domain-containing protein 62; TrEMBL-Plants: tr|K7MEJ2|K7MEJ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0411300
Domains
18
LotjaGi4g1v0169400.1
– Zinc finger CCCH domain protein; TAIR: AT1G32360.1 Zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q9LQM3|C3H12_ARATH Zinc finger CCCH domain-containing protein 12; TrEMBL-Plants: tr|G7LH15|G7LH15_MEDTR Zinc finger CCCH domain protein; Found in the gene: LotjaGi4g1v0169400
Domains
12
LotjaGi4g1v0268600.1
– Zinc finger CCCH domain protein; TAIR: AT3G19360.1 Zinc finger (CCCH-type) family protein; Swiss-Prot: sp|Q9LT81|C3H39_ARATH Zinc finger CCCH domain-containing protein 39; TrEMBL-Plants: tr|K7ML63|K7ML63_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0268600
Domains
12
LotjaGi4g1v0408600.1
– Zinc finger CCCH domain protein; TAIR: AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9LIH5|C3H38_ARATH Zinc finger CCCH domain-containing protein 38; TrEMBL-Plants: tr|G7LE04|G7LE04_MEDTR Zinc finger C-x8-C-x5-C-x3-H type family protein; Found in the gene: LotjaGi4g1v0408600
Domains
12
LotjaGi4g1v0408600.2
– Zinc finger CCCH domain protein; TAIR: AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9LIH5|C3H38_ARATH Zinc finger CCCH domain-containing protein 38; TrEMBL-Plants: tr|G7LE04|G7LE04_MEDTR Zinc finger C-x8-C-x5-C-x3-H type family protein; Found in the gene: LotjaGi4g1v0408600
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 7.14