Domain Predictions — View

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cd18789

Source: CDD

Description

SF2_C_XPB

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi4g1v0428600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA repair helicase; TAIR: AT5G41370.1 DNA repair helicase XPB1-like protein; Swiss-Prot: sp\|Q38861\|XPB1_ARATH DNA repair helicase XPB1; TrEMBL-Plants: tr\|V7CS33\|V7CS33_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0428600	Domains G3DSA:3.40.50.300 IPR001161 IPR001650 IPR006935 IPR014001 IPR027417 IPR032438 IPR032830 PF04851 PF13625 PF16203 PR00851 PS51192 PS51194 PTHR11274 PTHR11274:SF0 SM00487 SM00490 SSF52540 TIGR00603 cd18029 cd18789 mobidb-lite	23
LotjaGi4g1v0428600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA repair helicase; TAIR: AT5G41370.1 DNA repair helicase XPB1-like protein; Swiss-Prot: sp\|Q38861\|XPB1_ARATH DNA repair helicase XPB1; TrEMBL-Plants: tr\|V7CS33\|V7CS33_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0428600	Domains G3DSA:3.40.50.300 IPR001161 IPR001650 IPR006935 IPR014001 IPR027417 IPR032438 IPR032830 PF04851 PF13625 PF16203 PR00851 PS51192 PS51194 PTHR11274 PTHR11274:SF0 SM00487 SM00490 SSF52540 TIGR00603 cd18029 cd18789 mobidb-lite	23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00