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IPR032438

Description

IPR032438 is a ERCC3/RAD25/XPB helicase, C-terminal domain.

<p>This is the C-terminal helicase domain of ERCC3, RAD25 and XPB helicases [[cite:PUB00065110]].</p> <p>XPB, also known as Ssl2, Ercc3, RepB, Rad25 or haywire, is a core subunit of the eukaryotic basal transcription factor complex TFIIH, which plays a dual role in transcription and DNA repair [[cite:PUB00076972]]. It is involved in nucleotide excision repair of DNA and in RNA transcription by RNA polymerase II [[cite:PUB00062805]]. TFIIH is a multiprotein complex composed of a 7-subunit core, including XPB, p62, p52, p44, p34 and TTDA, associated with a 3-subunit CDK-activating kinase module consisting of MAT1, cyclin H and Cdk7 [[cite:PUB00062813]]. XPB functions by opening DNA either around the RNA transcription start site or at sites of DNA damage [[cite:PUB00057247]]. It is also required for spliced leader RNA gene transcription by RNA polymerase II, where TFIIH plays an essential role in transcription initiation [[cite:PUB00160831]]. Once the pre-initiation complex has been established, TFIIH is necessary for promoter opening and promoter escape, processes that depend on the ATPase activity of XPB [[cite:PUB00160831]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
PREDICTED: DNA repair helicase XPB1-like [Cicer arietinum] gi|502139224|ref|XP_004503689.1| 22
PREDICTED: DNA repair helicase XPB1-like [Glycine max] gi|356513365|ref|XP_003525384.1| 23
DNA repair helicase; TAIR: AT5G41370.1 DNA repair helicase XPB1-like protein; Swiss-Prot: sp|Q38861|XPB1_ARATH DNA repair helicase XPB1; TrEMBL-Plants: tr|V7CS33|V7CS33_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0428600 23
DNA repair helicase; TAIR: AT5G41370.1 DNA repair helicase XPB1-like protein; Swiss-Prot: sp|Q38861|XPB1_ARATH DNA repair helicase XPB1; TrEMBL-Plants: tr|V7CS33|V7CS33_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0428600 23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 25.00