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GO:0004535

View this GO term in other databases

Overview

Field Value
Namespace Molecular function
Short description Poly(A)-specific ribonuclease activity
Full defintion Catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP.
Subterm of

Relationships

The relationship of GO:0004535 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
EC3.1.13.4
ISBN

· ISBN: 0198547684

, · pages

Associated Lotus transcripts 17

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
LotjaGi1g1v0378700.1
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SY01|I3SY01_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0378700
GO terms
2
LotjaGi1g1v0378700.2
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SY01|I3SY01_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0378700
GO terms
2
LotjaGi1g1v0378700.3
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SY01|I3SY01_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0378700
GO terms
2
LotjaGi1g1v0576600_LC.1
– CCR4-NOT transcription complex family protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|T2DP39|T2DP39_PHAVU CCR4-associated factor 1-like protein 11; Found in the gene: LotjaGi1g1v0576600_LC
GO terms
2
LotjaGi1g1v0576600_LC.2
– CCR4-NOT transcription complex family protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|T2DP39|T2DP39_PHAVU CCR4-associated factor 1-like protein 11; Found in the gene: LotjaGi1g1v0576600_LC
GO terms
2
LotjaGi1g1v0576600_LC.3
– CCR4-NOT transcription complex family protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|T2DP39|T2DP39_PHAVU CCR4-associated factor 1-like protein 11; Found in the gene: LotjaGi1g1v0576600_LC
GO terms
2
LotjaGi1g1v0735100.1
– CCR4-NOT transcription complex family protein; TAIR: AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9FMS6|CAF1K_ARATH Probable CCR4-associated factor 1 homolog 11; TrEMBL-Plants: tr|I1NAS4|I1NAS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0735100
GO terms
2
LotjaGi3g1v0181000.1
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|I1LTY5|I1LTY5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0181000
GO terms
2
LotjaGi3g1v0350800.1
– CCR4-NOT transcription complex family protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SSR5|I3SSR5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0350800
GO terms
2
LotjaGi3g1v0350800.2
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SSR5|I3SSR5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0350800
GO terms
2
LotjaGi3g1v0350800.3
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SSR5|I3SSR5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0350800
GO terms
2
LotjaGi3g1v0350800.4
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7; TrEMBL-Plants: tr|I3SSR5|I3SSR5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0350800
GO terms
2
LotjaGi3g1v0473600.1
– CCR4-NOT transcription complex family protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|I1LRJ8|I1LRJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0473600
GO terms
2
LotjaGi3g1v0486800_LC.1
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9FMS6|CAF1K_ARATH Probable CCR4-associated factor 1 homolog 11; TrEMBL-Plants: tr|A0A067JTU3|A0A067JTU3_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0486800_LC
GO terms
2
LotjaGi5g1v0101300.1
– Polynucleotidyl transferase, ribonuclease H-like superfamily protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|A0A0L9U8M9|A0A0L9U8M9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0101300
GO terms
2
LotjaGi6g1v0313900_LC.1
– CCR4-NOT transcription complex family protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|I1NAS4|I1NAS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0313900_LC
GO terms
2
LotjaGi6g1v0313900_LC.2
– CCR4-NOT transcription complex family protein; TAIR: AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9; TrEMBL-Plants: tr|I1NAS4|I1NAS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0313900_LC
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0030014
Cellular component CCR4-NOT complex 1 5.88