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GO:0006189

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description 'de novo' IMP biosynthetic process
Full defintion The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate.
Subterm of

Relationships

The relationship of GO:0006189 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah
ISBN

· ISBN: 0716720094

, · pages

Associated Lotus transcripts 20

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0036669.1
– PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Glycine max] gi|356535191|ref|XP_003536132.1|
GO terms
1
Lj0g3v0078859.1
– PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Glycine max] gi|356535191|ref|XP_003536132.1|
GO terms
1
Lj0g3v0078859.2
– PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Glycine max] gi|356535191|ref|XP_003536132.1|
GO terms
2
Lj0g3v0241679.1
– PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial-like [Glycine max] gi|356512850|ref|XP_003525128.1|
GO terms
2
Lj0g3v0241679.2
– RecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial; AltName: Full=AIR synthase; Short=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; AltName: Full=VUpur5; Flags: Precursorgi|945060|gb|AAC14578.1| aminoimidazole ribonucleotide (AIRS) synthetase [Vigna unguiculata] gi|1709925|sp|P52424.1|PUR5_VIGUN
GO terms
2
Lj4g3v1236970.1
– Formyltetrahydrofolate deformylase [Medicago truncatula] gi|357502477|ref|XP_003621527.1|
GO terms
2
Lj4g3v1236970.2
– PREDICTED: formyltetrahydrofolate deformylase-like [Glycine max] gi|356563338|ref|XP_003549921.1|
GO terms
2
Lj4g3v2742680.1
– PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial-like [Glycine max] gi|356512850|ref|XP_003525128.1|
GO terms
2
Lj4g3v2742680.2
– RecName: Full=Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial; AltName: Full=AIR synthase; Short=AIRS; AltName: Full=Phosphoribosyl-aminoimidazole synthetase; AltName: Full=VUpur5; Flags: Precursorgi|945060|gb|AAC14578.1| aminoimidazole ribonucleotide (AIRS) synthetase [Vigna unguiculata] gi|1709925|sp|P52424.1|PUR5_VIGUN
GO terms
2
LotjaGi1g1v0649600.1
– Methionyl-tRNA formyltransferase; TAIR: AT1G31220.1 Formyl transferase; Swiss-Prot: sp|P52423|PUR3_VIGUN Phosphoribosylglycinamide formyltransferase, chloroplastic; TrEMBL-Plants: tr|A0A0S3RWK0|A0A0S3RWK0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0649600
GO terms
2
LotjaGi2g1v0405000.1
– Phosphoribosylformylglycinamidine synthase; TAIR: AT1G74260.1 purine biosynthesis 4; Swiss-Prot: sp|Q9M8D3|PUR4_ARATH Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072U5E4|A0A072U5E4_MEDTR Phosphoribosylformylglycinamidine synthase; Found in the gene: LotjaGi2g1v0405000
GO terms
2
LotjaGi4g1v0202000.1
– Methionyl-tRNA formyltransferase; TAIR: AT5G47435.1 formyltetrahydrofolate deformylase; Swiss-Prot: sp|Q93YQ3|PURU1_ARATH Formyltetrahydrofolate deformylase 1, mitochondrial; TrEMBL-Plants: tr|A0A0L9TQX6|A0A0L9TQX6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0202000
GO terms
2
LotjaGi4g1v0202000.2
– Formyltetrahydrofolate deformylase; TAIR: AT5G47435.1 formyltetrahydrofolate deformylase; Swiss-Prot: sp|Q93YQ3|PURU1_ARATH Formyltetrahydrofolate deformylase 1, mitochondrial; TrEMBL-Plants: tr|K7KN51|K7KN51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0202000
GO terms
2
LotjaGi4g1v0202000.3
– Methionyl-tRNA formyltransferase; TAIR: AT5G47435.1 formyltetrahydrofolate deformylase; Swiss-Prot: sp|Q93YQ3|PURU1_ARATH Formyltetrahydrofolate deformylase 1, mitochondrial; TrEMBL-Plants: tr|A0A0L9TQX6|A0A0L9TQX6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0202000
GO terms
2
LotjaGi4g1v0410200.2
– Phosphoribosylformylglycinamidine cyclo-ligase; TAIR: AT3G55010.1 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5); Swiss-Prot: sp|P52424|PUR5_VIGUN Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0L9TJC7|A0A0L9TJC7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0410200
GO terms
2
LotjaGi5g1v0211000.1
– Formate-dependent phosphoribosylglycinamide formyltransferase; TAIR: AT2G37690.1 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase; Swiss-Prot: sp|P55195|PUR6_VIGAC Phosphoribosylaminoimidazole carboxylase, chloroplastic; TrEMBL-Plants: tr|K7LJS8|K7LJS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0211000
GO terms
2
LotjaGi5g1v0315300.1
– Phosphoribosylformylglycinamidine cyclo-ligase; TAIR: AT3G55010.1 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5); Swiss-Prot: sp|P52424|PUR5_VIGUN Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0L9TJC7|A0A0L9TJC7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0315300
GO terms
2
LotjaGi6g1v0063600.1
– Phosphoribosylformylglycinamidine synthase; TAIR: AT1G74260.1 purine biosynthesis 4; Swiss-Prot: sp|Q9M8D3|PUR4_ARATH Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072TUU6|A0A072TUU6_MEDTR Phosphoribosylformylglycinamidine synthase; Found in the gene: LotjaGi6g1v0063600
GO terms
2
LotjaGi6g1v0063600.2
– Phosphoribosylformylglycinamidine synthase; TAIR: AT1G74260.1 purine biosynthesis 4; Swiss-Prot: sp|Q9M8D3|PUR4_ARATH Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072TUU6|A0A072TUU6_MEDTR Phosphoribosylformylglycinamidine synthase; Found in the gene: LotjaGi6g1v0063600
GO terms
2
LotjaGi6g1v0063600.3
– Phosphoribosylformylglycinamidine synthase; TAIR: AT1G74260.1 purine biosynthesis 4; Swiss-Prot: sp|Q9M8D3|PUR4_ARATH Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A072U5E4|A0A072U5E4_MEDTR Phosphoribosylformylglycinamidine synthase; Found in the gene: LotjaGi6g1v0063600
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0006189
Biological process 'de novo' IMP biosynthetic process 1 5.00