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GO:0034450

Overview

Field Value
Namespace Molecular function
Short description Ubiquitin-ubiquitin ligase activity
Full defintion Isoenergetic transfer of ubiquitin from one protein to an existing ubiquitin chain via the reaction X-ubiquitin + Y-ubiquitin -> Y-ubiquitin-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.
Subterm of

Relationships

The relationship of GO:0034450 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmcc
PMID
Ubiquitin chains are remodeled at the proteasome by opposing ubiquitin ligase and deubiquitinating activities.
Cell. ; 127 (7): 1401–13.PMID: 17190603

The ubiquitin ligase Hul5 was recently identified as a component of the proteasome, a multisubunit protease that degrades ubiquitin-protein conjugates. We report here a proteasome-dependent conjugating activity of Hul5 that endows proteasomes with the capacity to extend ubiquitin chains. hul5 mutants show reduced degradation of multiple proteasome substrates in vivo, suggesting that the polyubiquitin signal that targets substrates to the proteasome can be productively amplified at the proteasome. However, the products of Hul5 conjugation are subject to disassembly by a proteasome-bound deubiquitinating enzyme, Ubp6. A hul5 null mutation suppresses a ubp6 null mutation, suggesting that a balance of chain-extending and chain-trimming activities is required for proper proteasome function. As the association of Hul5 with proteasomes was found to be strongly stabilized by Ubp6, these enzymes may be situated in proximity to one another. We propose that through dynamic remodeling of ubiquitin chains, proteasomes actively regulate substrate commitment to degradation.

Associated Lotus transcripts 11

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
PREDICTED: E3 ubiquitin-protein ligase RKP-like [Glycine max] gi|356516283|ref|XP_003526825.1| 4
PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine max] gi|356551046|ref|XP_003543890.1| 4
PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine max] gi|356551046|ref|XP_003543890.1| 4
PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine max] gi|356551046|ref|XP_003543890.1| 4
E3 ubiquitin-protein ligase RKP; TAIR: AT2G22010.1 related to KPC1; Swiss-Prot: sp|Q9SIZ8|RKP_ARATH E3 ubiquitin-protein ligase RKP; TrEMBL-Plants: tr|I1KBB2|I1KBB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0311400 4
E3 ubiquitin-protein ligase RKP; TAIR: AT2G22010.1 related to KPC1; Swiss-Prot: sp|Q9SIZ8|RKP_ARATH E3 ubiquitin-protein ligase RKP; TrEMBL-Plants: tr|I1KBB2|I1KBB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0311400 4
Ubiquitin conjugation factor E4, putative; TAIR: AT5G15400.1 U-box domain-containing protein; Swiss-Prot: sp|Q9LF41|UBE4_ARATH Probable ubiquitin conjugation factor E4; TrEMBL-Plants: tr|A0A0S3T8K1|A0A0S3T8K1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0263400 4
Ubiquitin conjugation factor E4, putative; TAIR: AT5G15400.1 U-box domain-containing protein; Swiss-Prot: sp|Q9LF41|UBE4_ARATH Probable ubiquitin conjugation factor E4; TrEMBL-Plants: tr|A0A0S3T8K1|A0A0S3T8K1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0263400 4
Ubiquitin conjugation factor E4, putative; TAIR: AT5G15400.1 U-box domain-containing protein; Swiss-Prot: sp|Q9LF41|UBE4_ARATH Probable ubiquitin conjugation factor E4; TrEMBL-Plants: tr|A0A0S3T8K1|A0A0S3T8K1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0263400 4
Ubiquitin conjugation factor E4, putative; TAIR: AT5G15400.1 U-box domain-containing protein; Swiss-Prot: sp|Q9LF41|UBE4_ARATH Probable ubiquitin conjugation factor E4; TrEMBL-Plants: tr|A0A0S3T8K1|A0A0S3T8K1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0263400 4
Ubiquitin conjugation factor E4, putative; TAIR: AT5G15400.1 U-box domain-containing protein; Swiss-Prot: sp|Q9LF41|UBE4_ARATH Probable ubiquitin conjugation factor E4; TrEMBL-Plants: tr|A0A0R0EU58|A0A0R0EU58_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0263500_LC 4

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
Molecular function Ubiquitin-ubiquitin ligase activity 1 9.09