Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

GO:1990112

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description RQC complex
Full defintion A multiprotein complex that forms a stable complex with 60S ribosomal subunits containing stalled polypeptides and triggers their degradation (ribosomal quality control). In budding yeast, this complex includes Cdc48p, Rkr1p, Tae2p, Rqc1p, Npl4p and Ufd1p proteins.
Subterm of

Relationships

The relationship of GO:1990112 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:1990112, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

  • Drag and drop nodes to manually position (i.e. fix) them
  • Double click on a node to unfix the node
  • Press Alt and double click to visit the page containing further details of a GO term
  • Right clicking on a node will reveal a context menu

Controls

Force layout

Every force layout is different—we have picked a set of parameters which suits most GO ancestor tree chart well. If you mess something up—don't worry: hitting the "reset view" button above will reset the chart to its default layout.

Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCrb
PMID
Protein degradation: ensuring quality at the ribosome.Wrighton KH
Nat Rev Mol Cell Biol. 2013 Jan; 14 (1): 1.PMID: 23232563

Associated Lotus transcripts 2

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
LotjaGi1g1v0111300.1
– E3 ubiquitin-protein ligase listerin-like protein; TAIR: AT5G58410.2 HEAT/U-box domain-containing protein; Swiss-Prot: sp|Q9FGI1|LTN1_ARATH E3 ubiquitin-protein ligase listerin; TrEMBL-Plants: tr|K7KAA3|K7KAA3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0111300
GO terms
3
LotjaGi1g1v0111300.2
– E3 ubiquitin-protein ligase listerin-like protein; TAIR: AT5G58410.2 HEAT/U-box domain-containing protein; Swiss-Prot: sp|Q9FGI1|LTN1_ARATH E3 ubiquitin-protein ligase listerin; TrEMBL-Plants: tr|K7KAA3|K7KAA3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0111300
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:1990116
Biological process Ribosome-associated ubiquitin-dependent protein catabolic process 1 50.00