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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0004229 |
| Transcript ID | Lj0g3v0004229.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phospholipid-transporting ATPase 1-like [Cicer arietinum] gi|502158473|ref|XP_004511165.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 122 | 122 | – | – | |
| MobiDBLite | 1 | 63 | 63 | – | – | |
| PANTHER | 40 | 1176 | 1137 | 0 | – | |
| PANTHER | 40 | 1176 | 1137 | 0 | ||
| Pfam | 82 | 147 | 66 | 5.70E-24 | ||
| SUPERFAMILY | 88 | 183 | 96 | 3.40E-52 | – | |
| TIGRFAM | 96 | 1157 | 1062 | 0 | ||
| TMHMM | 120 | 137 | 18 | – | – | |
| Phobius | 123 | 141 | 19 | – | – | |
| Gene3D | 123 | 252 | 130 | 6.90E-37 | ||
| Phobius | 142 | 146 | 5 | – | – | |
| TMHMM | 142 | 161 | 20 | – | – | |
| Phobius | 147 | 165 | 19 | – | – | |
| Phobius | 166 | 341 | 176 | – | – | |
| Pfam | 179 | 424 | 246 | 1.60E-07 | ||
| SUPERFAMILY | 179 | 250 | 72 | 4.84E-17 | – | |
| SUPERFAMILY | 283 | 320 | 38 | 4.84E-17 | – | |
| Gene3D | 288 | 321 | 34 | 6.90E-37 | ||
| SUPERFAMILY | 325 | 373 | 49 | 3.40E-52 | – | |
| Phobius | 342 | 364 | 23 | – | – | |
| TMHMM | 342 | 364 | 23 | – | – | |
| Phobius | 365 | 398 | 34 | – | – | |
| TIGRFAM | 398 | 487 | 90 | 2.60E-18 | ||
| TMHMM | 399 | 421 | 23 | – | – | |
| Phobius | 399 | 420 | 22 | – | – | |
| SUPERFAMILY | 400 | 460 | 61 | 3.40E-52 | – | |
| Phobius | 421 | 949 | 529 | – | – | |
| SUPERFAMILY | 453 | 478 | 26 | 5.43E-33 | ||
| Gene3D | 456 | 503 | 48 | 1.00E-36 | ||
| PRINTS | 466 | 480 | 15 | 4.00E-07 | – | |
| ProSitePatterns | 468 | 474 | 7 | – | ||
| SUPERFAMILY | 472 | 502 | 31 | 4.58E-18 | ||
| Gene3D | 535 | 730 | 196 | 1.00E-36 | ||
| SUPERFAMILY | 536 | 735 | 200 | 4.58E-18 | ||
| Pfam | 571 | 646 | 76 | 5.60E-08 | – | |
| SUPERFAMILY | 671 | 792 | 122 | 5.43E-33 | ||
| Gene3D | 731 | 787 | 57 | 5.70E-51 | ||
| TIGRFAM | 853 | 968 | 116 | 3.10E-32 | ||
| Gene3D | 853 | 938 | 86 | 5.70E-51 | ||
| SUPERFAMILY | 856 | 923 | 68 | 5.43E-33 | ||
| PRINTS | 882 | 901 | 20 | 4.00E-07 | – | |
| Pfam | 910 | 1150 | 241 | 1.00E-70 | ||
| SUPERFAMILY | 931 | 1149 | 219 | 3.40E-52 | – | |
| TMHMM | 950 | 972 | 23 | – | – | |
| Phobius | 950 | 971 | 22 | – | – | |
| Phobius | 972 | 976 | 5 | – | – | |
| Phobius | 977 | 994 | 18 | – | – | |
| TMHMM | 977 | 994 | 18 | – | – | |
| Phobius | 995 | 1022 | 28 | – | – | |
| Phobius | 1023 | 1047 | 25 | – | – | |
| TMHMM | 1024 | 1046 | 23 | – | – | |
| Phobius | 1048 | 1052 | 5 | – | – | |
| Phobius | 1053 | 1073 | 21 | – | – | |
| TMHMM | 1056 | 1073 | 18 | – | – | |
| Phobius | 1074 | 1084 | 11 | – | – | |
| Phobius | 1085 | 1114 | 30 | – | – | |
| TMHMM | 1086 | 1108 | 23 | – | – | |
| TMHMM | 1113 | 1135 | 23 | – | – | |
| Phobius | 1115 | 1119 | 5 | – | – | |
| Phobius | 1120 | 1140 | 21 | – | – | |
| Phobius | 1141 | 1178 | 38 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Expression pattern of Lj0g3v0004229.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0004229.1, powered by CORGI.
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