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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0004249 |
| Transcript ID | Lj0g3v0004249.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic-like [Glycine max] gi|356556680|ref|XP_003546651.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| Phobius | 18 | 25 | 8 | – | – | |
| MobiDBLite | 18 | 62 | 45 | – | – | |
| Phobius | 26 | 340 | 315 | – | – | |
| PANTHER | 56 | 340 | 285 | 3.90E-174 | – | |
| PANTHER | 56 | 340 | 285 | 3.90E-174 | – | |
| Gene3D | 68 | 290 | 223 | 3.10E-49 | ||
| SUPERFAMILY | 72 | 291 | 220 | 6.72E-45 | ||
| PRINTS | 72 | 89 | 18 | 1.70E-17 | ||
| CDD | 73 | 294 | 222 | 4.31E-51 | – | |
| Pfam | 73 | 268 | 196 | 4.60E-42 | ||
| PRINTS | 148 | 159 | 12 | 1.70E-17 | ||
| PRINTS | 148 | 159 | 12 | 3.10E-06 | ||
| PRINTS | 198 | 214 | 17 | 1.70E-17 | ||
| PRINTS | 204 | 212 | 9 | 3.10E-06 | ||
| ProSitePatterns | 212 | 240 | 29 | – | ||
| PRINTS | 225 | 244 | 20 | 3.10E-06 | ||
| PRINTS | 225 | 244 | 20 | 1.70E-17 | ||
| PRINTS | 249 | 266 | 18 | 1.70E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of Lj0g3v0004249.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0004249.1, powered by CORGI.
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