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Lj0g3v0007959.1

Overview

Field Value
Gene ID Lj0g3v0007959
Transcript ID Lj0g3v0007959.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description sucrose-phosphatase [Medicago truncatula] gi|11127759|gb|AAG31076.1|AF283566_1
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SFLD
SFLDF00043
1 262 262 0 –
PANTHER
PTHR12526:SF2
1 410 410 6.60E-211 –
PANTHER
PTHR12526
1 410 410 6.60E-211 –
SFLD
SFLDG01141
5 263 259 0 –
TIGRFAM
TIGR01485
9 262 254 4.90E-119
IPR012847
Pfam
PF05116
9 261 253 2.90E-104
IPR006380
Gene3D
G3DSA:3.40.50.1000
11 92 82 3.00E-28
IPR023214
TIGRFAM
TIGR01484
11 219 209 5.70E-35
IPR006379
SUPERFAMILY
SSF56784
11 230 220 7.34E-28
IPR023214
TIGRFAM
TIGR01482
12 257 246 2.60E-72 –
Gene3D
G3DSA:3.90.1070.10
102 169 68 5.40E-29 –
Gene3D
G3DSA:3.40.50.1000
170 261 92 3.00E-28
IPR023214
Pfam
PF08472
262 393 132 2.80E-51
IPR013679
MobiDBLite
mobidb-lite
262 281 20 – –
SUPERFAMILY
SSF54427
284 409 126 1.56E-24
IPR032710
Gene3D
G3DSA:3.10.450.50
286 409 124 1.80E-07
IPR032710

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0005986
Biological process Sucrose biosynthetic process The chemical reactions and pathways resulting in the formation of sucrose, the disaccharide fructofuranosyl-glucopyranoside.
Subterm of
GO:0050307
Molecular function Sucrose-phosphate phosphatase activity Catalysis of the reaction: sucrose 6F-phosphate + H2O = sucrose + phosphate.
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj0g3v0007959.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0007959.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.