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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0011199 |
| Transcript ID | Lj0g3v0011199.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: villin-2-like [Glycine max] gi|356500511|ref|XP_003519075.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 471 | 471 | 0 | ||
| PANTHER | 1 | 471 | 471 | 0 | ||
| Gene3D | 9 | 128 | 120 | 8.10E-32 | ||
| SUPERFAMILY | 9 | 148 | 140 | 1.12E-38 | – | |
| CDD | 12 | 124 | 113 | 2.59E-64 | – | |
| SMART | 19 | 117 | 99 | 3.40E-25 | ||
| Pfam | 29 | 111 | 83 | 1.50E-14 | ||
| PRINTS | 38 | 54 | 17 | 8.30E-23 | ||
| PRINTS | 64 | 82 | 19 | 8.30E-23 | ||
| PRINTS | 97 | 117 | 21 | 8.30E-23 | ||
| Gene3D | 129 | 240 | 112 | 1.70E-24 | ||
| SUPERFAMILY | 134 | 239 | 106 | 4.17E-19 | – | |
| SMART | 137 | 234 | 98 | 7.70E-22 | ||
| CDD | 138 | 232 | 95 | 4.27E-31 | – | |
| Pfam | 150 | 210 | 61 | 4.20E-10 | ||
| PRINTS | 150 | 170 | 21 | 8.30E-23 | ||
| SUPERFAMILY | 223 | 345 | 123 | 8.18E-23 | – | |
| SMART | 252 | 344 | 93 | 1.90E-19 | ||
| CDD | 254 | 343 | 90 | 9.77E-29 | – | |
| Gene3D | 254 | 347 | 94 | 8.30E-21 | ||
| Pfam | 268 | 337 | 70 | 3.50E-13 | ||
| PRINTS | 273 | 295 | 23 | 8.30E-23 | ||
| PRINTS | 302 | 321 | 20 | 8.30E-23 | ||
| SUPERFAMILY | 383 | 472 | 90 | 1.82E-18 | – | |
| Gene3D | 386 | 472 | 87 | 1.00E-16 | ||
| CDD | 386 | 472 | 87 | 1.30E-33 | – | |
| SMART | 392 | 473 | 82 | 0.05 | ||
| Pfam | 409 | 472 | 64 | 9.30E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Actin filament binding | Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. | ||
| Biological process | Actin filament bundle assembly | The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness. |
Expression pattern of Lj0g3v0011199.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0011199.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.