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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007122
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 30 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.881s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0011199.1
n.a. PREDICTED: villin-2-like [Glycine max] gi|356500511|ref|XP_003519075.1| chr0 4354558 4375992 -
4 domain predictions
1 GO term
Lj0g3v0011199.3
n.a. PREDICTED: villin-2-like isoform 1 [Glycine max] gi|356534770|ref|XP_003535925.1| chr0 4354558 4370176 -
4 domain predictions
1 GO term
Lj0g3v0114229.1
n.a. PREDICTED: villin-3-like [Cicer arietinum] gi|502166332|ref|XP_004513861.1| chr0 50066030 50067660 +
3 domain predictions
1 GO term
Lj0g3v0114239.1
n.a. PREDICTED: villin-2-like [Solanum lycopersicum] gi|460408618|ref|XP_004249740.1| chr0 50067844 50070428 +
4 domain predictions
1 GO term
Lj0g3v0258459.1
n.a. PREDICTED: villin-2-like isoform 1 [Glycine max] gi|356534770|ref|XP_003535925.1| chr0 134176531 134185908 -
4 domain predictions
1 GO term
Lj0g3v0258459.3
n.a. PREDICTED: villin-2-like isoform 2 [Glycine max] gi|356534772|ref|XP_003535926.1| chr0 134182685 134185908 -
4 domain predictions
1 GO term
Lj0g3v0266789.1
n.a. PREDICTED: villin-4-like [Glycine max] gi|356530312|ref|XP_003533726.1| chr0 138231880 138240221 +
4 domain predictions
1 GO term
Lj0g3v0338629.1
n.a. PREDICTED: villin-4-like isoform 1 [Glycine max] gi|356556212|ref|XP_003546420.1| chr0 177313012 177316622 -
4 domain predictions
1 GO term
Lj1g3v4241150.1
n.a. PREDICTED: villin-2-like isoform X5 [Cicer arietinum] gi|502108740|ref|XP_004493490.1| chr1 50143106 50155417 -
4 domain predictions
1 GO term
Lj4g3v2120640.1
n.a. Villin-4 [Medicago truncatula] gi|357479579|ref|XP_003610075.1| chr4 29141351 29143570 -
2 domain predictions
1 GO term
LotjaGi1g1v0672500.1
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|A0A0S3RXC8|A0A0S3RXC8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0672500 LjG1.1_chr1 123728479 123741720 -
4 domain predictions
1 GO term
LotjaGi1g1v0672500.2
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|A0A1J7I9H4|A0A1J7I9H4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0672500 LjG1.1_chr1 123728479 123741720 -
4 domain predictions
1 GO term
LotjaGi1g1v0672500.3
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|A0A1J7I9H4|A0A1J7I9H4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0672500 LjG1.1_chr1 123729385 123737852 -
4 domain predictions
1 GO term
LotjaGi1g1v0672500.4
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|G7KTI5|G7KTI5_MEDTR Villin; Found in the gene: LotjaGi1g1v0672500 LjG1.1_chr1 123729385 123738694 -
4 domain predictions
1 GO term
LotjaGi1g1v0672500.5
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|A0A0S3RXC8|A0A0S3RXC8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0672500 LjG1.1_chr1 123729385 123738694 -
4 domain predictions
1 GO term
LotjaGi1g1v0672500.6
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|A0A0S3RXC8|A0A0S3RXC8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0672500 LjG1.1_chr1 123729385 123738694 -
4 domain predictions
1 GO term
LotjaGi4g1v0303900.1
n.a. Villin; TAIR: AT4G30160.1 villin 4; Swiss-Prot: sp|O65570|VILI4_ARATH Villin-4; TrEMBL-Plants: tr|K7LWU7|K7LWU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0303900 LjG1.1_chr4 67888113 67897285 -
4 domain predictions
1 GO term
LotjaGi4g1v0303900.2
n.a. Villin; TAIR: AT4G30160.1 villin 4; Swiss-Prot: sp|O65570|VILI4_ARATH Villin-4; TrEMBL-Plants: tr|K7LWU7|K7LWU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0303900 LjG1.1_chr4 67888632 67896097 -
4 domain predictions
1 GO term
LotjaGi5g1v0138400.1
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|K7K9D0|K7K9D0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0138400 LjG1.1_chr5 33260405 33298488 -
4 domain predictions
1 GO term
LotjaGi5g1v0138400.2
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|K7K9D0|K7K9D0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0138400 LjG1.1_chr5 33260405 33298488 -
4 domain predictions
1 GO term
LotjaGi5g1v0138400.3
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|K7K9D0|K7K9D0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0138400 LjG1.1_chr5 33260405 33298488 -
4 domain predictions
1 GO term
LotjaGi5g1v0138400.4
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|K7K9D0|K7K9D0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0138400 LjG1.1_chr5 33271014 33298451 -
4 domain predictions
1 GO term
LotjaGi5g1v0138400.5
n.a. Villin; TAIR: AT2G41740.1 villin 2; Swiss-Prot: sp|O81644|VILI2_ARATH Villin-2; TrEMBL-Plants: tr|K7LIQ6|K7LIQ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0138400 LjG1.1_chr5 33271624 33294723 -
4 domain predictions
1 GO term
LotjaGi6g1v0112900.1
n.a. Villin; TAIR: AT2G29890.1 villin-like 1; Swiss-Prot: sp|O81643|VILI1_ARATH Villin-1; TrEMBL-Plants: tr|I1N029|I1N029_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0112900 LjG1.1_chr6 26924220 26936089 +
4 domain predictions
1 GO term
LotjaGi6g1v0112900.2
n.a. Villin; TAIR: AT2G29890.1 villin-like 1; Swiss-Prot: sp|O81643|VILI1_ARATH Villin-1; TrEMBL-Plants: tr|I1N029|I1N029_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0112900 LjG1.1_chr6 26925599 26935005 +
4 domain predictions
1 GO term
LotjaGi6g1v0240100.1
n.a. Villin; TAIR: AT4G30160.1 villin 4; Swiss-Prot: sp|O65570|VILI4_ARATH Villin-4; TrEMBL-Plants: tr|A0A0L9UAV1|A0A0L9UAV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0240100 LjG1.1_chr6 55149423 55167183 +
4 domain predictions
1 GO term
LotjaGi6g1v0240100.2
n.a. Villin; TAIR: AT4G30160.1 villin 4; Swiss-Prot: sp|O65570|VILI4_ARATH Villin-4; TrEMBL-Plants: tr|A0A0L9UAV1|A0A0L9UAV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0240100 LjG1.1_chr6 55151506 55166599 +
4 domain predictions
1 GO term
LotjaGi6g1v0240100.3
n.a. Villin; TAIR: AT4G30160.1 villin 4; Swiss-Prot: sp|O65570|VILI4_ARATH Villin-4; TrEMBL-Plants: tr|A0A0L9UAV1|A0A0L9UAV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0240100 LjG1.1_chr6 55151506 55166599 +
4 domain predictions
1 GO term
LotjaGi6g1v0240100.4
n.a. Villin; TAIR: AT4G30160.1 villin 4; Swiss-Prot: sp|O65570|VILI4_ARATH Villin-4; TrEMBL-Plants: tr|A0A0L9UAV1|A0A0L9UAV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0240100 LjG1.1_chr6 55151506 55166599 +
4 domain predictions
1 GO term
LotjaGi6g1v0240100.5
n.a. Villin; TAIR: AT4G30160.1 villin 4; Swiss-Prot: sp|O65570|VILI4_ARATH Villin-4; TrEMBL-Plants: tr|A0A0L9UAV1|A0A0L9UAV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0240100 LjG1.1_chr6 55158689 55166599 +
4 domain predictions
1 GO term