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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0011199 |
| Transcript ID | Lj0g3v0011199.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: villin-2-like isoform 1 [Glycine max] gi|356534770|ref|XP_003535925.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 2 | 99 | 98 | 3.60E-13 | ||
| PANTHER | 14 | 103 | 90 | 7.70E-112 | ||
| PANTHER | 14 | 103 | 90 | 7.70E-112 | ||
| CDD | 15 | 100 | 86 | 9.01E-34 | – | |
| Gene3D | 15 | 114 | 100 | 4.90E-17 | ||
| SUPERFAMILY | 15 | 113 | 99 | 2.29E-18 | – | |
| Pfam | 18 | 90 | 73 | 1.60E-05 | ||
| PRINTS | 25 | 47 | 23 | 1.30E-09 | ||
| PRINTS | 54 | 73 | 20 | 1.30E-09 | ||
| MobiDBLite | 154 | 176 | 23 | – | – | |
| MobiDBLite | 189 | 209 | 21 | – | – | |
| MobiDBLite | 221 | 308 | 88 | – | – | |
| PANTHER | 264 | 353 | 90 | 7.70E-112 | ||
| PANTHER | 264 | 353 | 90 | 7.70E-112 | ||
| Gene3D | 280 | 354 | 75 | 1.80E-21 | ||
| ProSiteProfiles | 289 | 354 | 66 | 19.612 | ||
| SUPERFAMILY | 289 | 354 | 66 | 1.05E-20 | ||
| SMART | 319 | 354 | 36 | 1.30E-15 | ||
| Pfam | 319 | 354 | 36 | 1.70E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Actin binding | Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. | ||
| Biological process | Cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures. | ||
| Molecular function | Actin filament binding | Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. | ||
| Biological process | Actin filament bundle assembly | The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness. |
Expression pattern of Lj0g3v0011199.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0011199.3, powered by CORGI.
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