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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0024489 |
| Transcript ID | Lj0g3v0024489.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | F-box family protein [Medicago truncatula] gi|357505507|ref|XP_003623042.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 340 | 340 | – | – | |
| ProSiteProfiles | 2 | 52 | 51 | 12.014 | ||
| SUPERFAMILY | 3 | 60 | 58 | 5.63E-14 | ||
| PANTHER | 3 | 329 | 327 | 5.40E-70 | – | |
| PANTHER | 3 | 329 | 327 | 5.40E-70 | – | |
| Gene3D | 3 | 313 | 311 | 1.90E-15 | ||
| Pfam | 5 | 39 | 35 | 1.10E-08 | ||
| SMART | 8 | 49 | 42 | 1.50E-04 | ||
| SUPERFAMILY | 100 | 315 | 216 | 1.50E-08 | ||
| Pfam | 299 | 329 | 31 | 4.30E-07 | ||
| TMHMM | 339 | 358 | 20 | – | – | |
| Phobius | 341 | 360 | 20 | – | – | |
| Phobius | 361 | 368 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0024489.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0024489.1, powered by CORGI.
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