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Lj0g3v0036909.1

Overview

Field Value
Gene ID Lj0g3v0036909
Transcript ID Lj0g3v0036909.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: constitutive photomorphogenesis protein 10-like [Cicer arietinum] gi|502140763|ref|XP_004504327.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 22 22
PANTHER 10 168 159 6.70E-101
SUPERFAMILY 10 167 158 3.02E-55
Gene3D 17 167 151 2.50E-60
SMART 25 168 144 6.70E-55
CDD 25 163 139 1.96E-57
ProSiteProfiles 25 157 133 36.739
Pfam 26 161 136 3.20E-40

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj0g3v0036909.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0036909.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.