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Lj0g3v0043739.1

Overview

Field Value
Gene ID Lj0g3v0043739
Transcript ID Lj0g3v0043739.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: potassium transporter 8-like [Glycine max] gi|356573392|ref|XP_003554845.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 59 59
PANTHER 1 649 649 0
PANTHER 1 649 649 0
TMHMM 20 42 23
TIGRFAM 23 629 607 8.50E-237
Pfam 25 606 582 4.30E-194
Phobius 60 81 22
TMHMM 62 84 23
Phobius 82 153 72
Phobius 154 179 26
TMHMM 154 176 23
Phobius 180 198 19
Phobius 199 216 18
Phobius 217 222 6
TMHMM 222 244 23
Phobius 223 244 22
Phobius 245 268 24
TMHMM 269 291 23
Phobius 269 289 21
Phobius 290 300 11
Phobius 301 321 21
TMHMM 301 323 23
Phobius 322 345 24
Phobius 346 371 26
Phobius 372 391 20
Phobius 392 416 25
TMHMM 396 415 20
Phobius 417 427 11
TMHMM 425 447 23
Phobius 428 447 20
Phobius 448 453 6
TMHMM 454 476 23
Phobius 454 476 23
Phobius 477 481 5
TMHMM 481 503 23
Phobius 482 502 21
Phobius 503 649 147
TMHMM 515 532 18

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Potassium ion transmembrane transporter activity Enables the transfer of potassium ions (K+) from one side of a membrane to the other.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Biological process Potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of Lj0g3v0043739.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0043739.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.