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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0056779 |
| Transcript ID | Lj0g3v0056779.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | D-alanine--D-alanine ligase [Medicago truncatula] gi|357506461|ref|XP_003623519.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 134 | 134 | 2.50E-96 | – | |
| PANTHER | 1 | 134 | 134 | 2.50E-96 | – | |
| Gene3D | 66 | 106 | 41 | 1.70E-33 | ||
| SUPERFAMILY | 67 | 143 | 77 | 4.78E-21 | ||
| Pfam | 67 | 239 | 173 | 4.10E-16 | ||
| Gene3D | 162 | 239 | 78 | 1.70E-33 | ||
| PANTHER | 186 | 332 | 147 | 2.50E-96 | – | |
| PANTHER | 186 | 332 | 147 | 2.50E-96 | – | |
| SUPERFAMILY | 197 | 249 | 53 | 4.78E-21 | ||
| ProSitePatterns | 217 | 228 | 12 | – | ||
| Gene3D | 241 | 269 | 29 | 4.50E-20 | ||
| SUPERFAMILY | 300 | 487 | 188 | 2.30E-12 | – | |
| PANTHER | 351 | 391 | 41 | 2.50E-96 | – | |
| PANTHER | 351 | 391 | 41 | 2.50E-96 | – | |
| Gene3D | 390 | 488 | 99 | 4.50E-20 | ||
| Pfam | 391 | 488 | 98 | 4.60E-07 | ||
| PANTHER | 410 | 488 | 79 | 2.50E-96 | – | |
| PANTHER | 410 | 488 | 79 | 2.50E-96 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | D-alanine-D-alanine ligase activity | Catalysis of the reaction: 2 D-alanine + ATP = D-alanyl-D-alanine + ADP + 2 H(+) + phosphate. |
Expression pattern of Lj0g3v0056779.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0056779.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.