Domain Predictions — View

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IPR000291

Source: InterPro

Description

IPR000291 is a D-alanine--D-alanine ligase/VANA/B/C, conserved site.

<p>D-alanine--D-alanine ligase ([ec:6.3.2.4]) is a bacterial enzyme involved in cell-wall biosynthesis. It participates in forming UDP-N-acetylmuramyl pentapeptide, the peptidoglycan precursor. These enzymes are proteins of 300 to 360 amino acids containing many conserved regions. The N-terminal Gly-rich region could be involved in ATP-binding [[cite:PUB00000444]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0056779.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	D-alanine--D-alanine ligase [Medicago truncatula] gi\|357506461\|ref\|XP_003623519.1\|	Domains G3DSA:3.30.470.20 G3DSA:3.40.50.20 IPR000291 IPR011095 IPR011127 IPR013816 IPR016185 PF01820 PF07478 PS00843 PTHR23132 PTHR23132:SF0 SSF52440 SSF56059	14
Lj0g3v0056779.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	D-alanine--D-alanine ligase [Medicago truncatula] gi\|357506461\|ref\|XP_003623519.1\|	Domains G3DSA:3.30.470.20 G3DSA:3.40.50.20 IPR000291 IPR011095 IPR011127 IPR011761 IPR013816 IPR016185 NON_CYTOPLASMIC_DOMAIN PF01820 PF07478 PS00843 PS50975 PTHR23132 PTHR23132:SF0 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52440 SSF56059	21
Lj1g3v2418700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	D-alanine--D-alanine ligase [Medicago truncatula] gi\|357506461\|ref\|XP_003623519.1\|	Domains G3DSA:3.30.470.20 G3DSA:3.40.50.20 IPR000291 IPR011095 IPR011127 IPR011761 IPR013816 IPR016185 NON_CYTOPLASMIC_DOMAIN PF01820 PF07478 PS00843 PS00844 PS50975 PTHR23132 PTHR23132:SF0 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52440 SSF56059	22
Lj1g3v2418700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	D-alanine--D-alanine ligase [Medicago truncatula] gi\|357506461\|ref\|XP_003623519.1\|	Domains G3DSA:3.30.470.20 G3DSA:3.40.50.20 IPR000291 IPR011095 IPR011127 IPR011761 IPR013816 IPR016185 NON_CYTOPLASMIC_DOMAIN PF01820 PF07478 PS00844 PS50975 PTHR23132 PTHR23132:SF0 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52440 SSF56059	21
LotjaGi1g1v0450300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	D-alanine--D-alanine ligase; TAIR: AT3G08840.2 D-alanine-D-alanine ligase family; Swiss-Prot: sp\|Q6MQ94\|DDL_BDEBA D-alanine--D-alanine ligase; TrEMBL-Plants: tr\|I1L754\|I1L754_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0450300	Domains G3DSA:3.30.470.20 G3DSA:3.40.50.20 IPR000291 IPR011095 IPR011127 IPR011761 IPR016185 NON_CYTOPLASMIC_DOMAIN PF01820 PF07478 PS00843 PS00844 PS50975 PTHR23132 PTHR23132:SF0 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52440 SSF56059	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF56059	SUPERFAMILY	1	20.00