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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0060929 |
| Transcript ID | Lj0g3v0060929.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Ankyrin repeat-containing protein [Medicago truncatula] gi|358347224|ref|XP_003637659.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 534 | 534 | 0 | – | |
| Phobius | 1 | 350 | 350 | – | – | |
| PANTHER | 1 | 534 | 534 | 0 | – | |
| Gene3D | 15 | 102 | 88 | 7.10E-09 | ||
| SUPERFAMILY | 17 | 293 | 277 | 1.59E-47 | ||
| CDD | 56 | 183 | 128 | 1.09E-18 | – | |
| ProSiteProfiles | 59 | 293 | 235 | 32.227 | ||
| SMART | 59 | 87 | 29 | 380 | ||
| SMART | 94 | 123 | 30 | 72 | ||
| Pfam | 99 | 187 | 89 | 1.80E-12 | ||
| Gene3D | 103 | 173 | 71 | 2.40E-14 | ||
| CDD | 125 | 251 | 127 | 1.70E-26 | – | |
| SMART | 128 | 158 | 31 | 190 | ||
| SMART | 162 | 191 | 30 | 0.012 | ||
| ProSiteProfiles | 162 | 189 | 28 | 9.858 | ||
| Gene3D | 174 | 294 | 121 | 9.90E-27 | ||
| Pfam | 195 | 259 | 65 | 1.90E-10 | ||
| SMART | 196 | 226 | 31 | 0.89 | ||
| CDD | 225 | 293 | 69 | 1.57E-07 | – | |
| ProSiteProfiles | 230 | 252 | 23 | 8.523 | ||
| SMART | 230 | 260 | 31 | 0.01 | ||
| Pfam | 346 | 455 | 110 | 6.80E-22 | ||
| TMHMM | 351 | 373 | 23 | – | – | |
| Phobius | 351 | 373 | 23 | – | – | |
| Phobius | 374 | 392 | 19 | – | – | |
| Phobius | 393 | 422 | 30 | – | – | |
| TMHMM | 393 | 415 | 23 | – | – | |
| Phobius | 423 | 433 | 11 | – | – | |
| Phobius | 434 | 456 | 23 | – | – | |
| TMHMM | 436 | 458 | 23 | – | – | |
| Phobius | 457 | 461 | 5 | – | – | |
| Phobius | 462 | 487 | 26 | – | – | |
| TMHMM | 463 | 485 | 23 | – | – | |
| Phobius | 488 | 534 | 47 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0060929.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0060929.1, powered by CORGI.
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