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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0061149 |
| Transcript ID | Lj0g3v0061149.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | LATD/NIP [Medicago truncatula] gi|357436681|ref|XP_003588616.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 71 | 71 | – | – | |
| PANTHER | 1 | 580 | 580 | 0 | ||
| PANTHER | 1 | 580 | 580 | 0 | – | |
| Gene3D | 43 | 228 | 186 | 1.20E-08 | – | |
| CDD | 46 | 226 | 181 | 6.74E-04 | ||
| SUPERFAMILY | 46 | 241 | 196 | 6.15E-17 | ||
| TMHMM | 71 | 90 | 20 | – | – | |
| Phobius | 72 | 90 | 19 | – | – | |
| Phobius | 91 | 96 | 6 | – | – | |
| Pfam | 97 | 518 | 422 | 2.30E-78 | ||
| TMHMM | 97 | 119 | 23 | – | – | |
| Phobius | 97 | 118 | 22 | – | – | |
| Phobius | 119 | 137 | 19 | – | – | |
| Phobius | 138 | 164 | 27 | – | – | |
| TMHMM | 139 | 161 | 23 | – | – | |
| Phobius | 165 | 184 | 20 | – | – | |
| TMHMM | 182 | 204 | 23 | – | – | |
| Phobius | 185 | 204 | 20 | – | – | |
| Phobius | 205 | 215 | 11 | – | – | |
| TMHMM | 214 | 236 | 23 | – | – | |
| Phobius | 216 | 236 | 21 | – | – | |
| Phobius | 237 | 325 | 89 | – | – | |
| SUPERFAMILY | 313 | 552 | 240 | 6.15E-17 | ||
| Phobius | 326 | 346 | 21 | – | – | |
| Phobius | 347 | 365 | 19 | – | – | |
| TMHMM | 359 | 381 | 23 | – | – | |
| Phobius | 366 | 385 | 20 | – | – | |
| Phobius | 386 | 405 | 20 | – | – | |
| Phobius | 406 | 425 | 20 | – | – | |
| TMHMM | 408 | 425 | 18 | – | – | |
| Phobius | 426 | 444 | 19 | – | – | |
| Phobius | 445 | 466 | 22 | – | – | |
| TMHMM | 445 | 467 | 23 | – | – | |
| Phobius | 467 | 485 | 19 | – | – | |
| Phobius | 486 | 509 | 24 | – | – | |
| TMHMM | 487 | 509 | 23 | – | – | |
| Phobius | 510 | 532 | 23 | – | – | |
| TMHMM | 530 | 552 | 23 | – | – | |
| Phobius | 533 | 557 | 25 | – | – | |
| Phobius | 558 | 583 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0061149.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0061149.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.