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IPR014717 is a Translation elongation factor EF1B/small ribosomal subunit protein bS6.
<p>An α+β sandwich domain with a Ferredoxin-like fold can be found in the beta chain of the translation elongation factor EF1B [[cite:PUB00011832]], and in the small ribosomal subunit protein bS6 (ribosomal protein S6) [[cite:PUB00025100]].</p> <p>Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) [[cite:PUB00033953]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cicer arietinum] gi|502148510|ref|XP_004507191.1| | 16 | ||
| – | PREDICTED: elongation factor 1-delta 2-like isoform X1 [Cicer arietinum] gi|502148510|ref|XP_004507191.1| | 14 | ||
| – | 30S ribosomal protein S6 [Medicago truncatula] gi|357448827|ref|XP_003594689.1| | 13 | ||
| – | Translation elongation factor EF1B/ribosomal protein S6 family protein [Arabidopsis thaliana] gi|15217660|ref|NP_176632.1| | 11 | ||
| – | Elongation factor 1-beta [Medicago truncatula] gi|357493769|ref|XP_003617173.1| | 16 | ||
| – | 30S ribosomal protein S6; TAIR: AT3G18760.1 Translation elongation factor EF1B/ribosomal protein S6 family protein; Swiss-Prot: sp|B0TE72|RS6_HELMI 30S ribosomal protein S6; TrEMBL-Plants: tr|I3S8R0|I3S8R0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0223300 | 10 | ||
| – | Elongation factor 1-beta; TAIR: AT2G18110.1 Translation elongation factor EF1B/ribosomal protein S6 family protein; Swiss-Prot: sp|P93447|EF1D_PIMBR Elongation factor 1-delta; TrEMBL-Plants: tr|I3T5W1|I3T5W1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0222400 | 18 | ||
| – | 30S ribosomal protein S6; TAIR: AT3G18760.1 Translation elongation factor EF1B/ribosomal protein S6 family protein; Swiss-Prot: sp|Q9UT82|RT06_SCHPO 37S ribosomal protein MRP17, mitochondrial; TrEMBL-Plants: tr|I3S8R0|I3S8R0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0329300 | 10 | ||
| – | 30S ribosomal protein S6; TAIR: AT3G18760.1 Translation elongation factor EF1B/ribosomal protein S6 family protein; Swiss-Prot: sp|Q9UT82|RT06_SCHPO 37S ribosomal protein MRP17, mitochondrial; TrEMBL-Plants: tr|I3S8R0|I3S8R0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0329300 | 10 | ||
| – | Elongation factor 1-beta 1; TAIR: AT5G12110.1 elongation factor 1-beta 1; Swiss-Prot: sp|Q84WM9|EF1B1_ARATH Elongation factor 1-beta 1; TrEMBL-Plants: tr|I3SIG0|I3SIG0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0187900 | 17 | ||
| – | 30S ribosomal protein S6; TAIR: AT3G17170.1 Translation elongation factor EF1B/ribosomal protein S6 family protein; Swiss-Prot: sp|Q0VMF9|RS6_ALCBS 30S ribosomal protein S6; TrEMBL-Plants: tr|I3T7U7|I3T7U7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0261500 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 9.09 |