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Lj0g3v0063399.1

Overview

Field Value
Gene ID Lj0g3v0063399
Transcript ID Lj0g3v0063399.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: leucine-rich repeat extensin-like protein 3-like [Cicer arietinum] gi|502137809|ref|XP_004503194.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 27 27
SignalP 1 28 28
Phobius 1 13 13
SignalP 1 27 27
PANTHER 2 163 162 1.50E-57
PANTHER 2 163 162 1.50E-57
Phobius 14 22 9
Phobius 23 27 5
Phobius 28 143 116
MobiDBLite 63 111 49
PRINTS 66 78 13 1.00E-09
PRINTS 81 102 22 1.00E-09
PRINTS 103 119 17 1.00E-09
Phobius 144 162 19
TMHMM 145 162 18
Phobius 163 163 1

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj0g3v0063399.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0063399.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.