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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0070029 |
| Transcript ID | Lj0g3v0070029.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: casparian strip membrane protein 1-like [Cicer arietinum] gi|502178620|ref|XP_004516297.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | – | – | |
| PANTHER | 24 | 193 | 170 | 1.30E-106 | – | |
| PANTHER | 24 | 193 | 170 | 1.30E-106 | – | |
| Pfam | 30 | 178 | 149 | 1.30E-41 | ||
| TIGRFAM | 37 | 189 | 153 | 2.00E-39 | ||
| Phobius | 37 | 57 | 21 | – | – | |
| TMHMM | 38 | 60 | 23 | – | – | |
| Phobius | 58 | 76 | 19 | – | – | |
| Phobius | 77 | 103 | 27 | – | – | |
| TMHMM | 80 | 102 | 23 | – | – | |
| Phobius | 104 | 114 | 11 | – | – | |
| Phobius | 115 | 142 | 28 | – | – | |
| TMHMM | 115 | 137 | 23 | – | – | |
| Phobius | 143 | 167 | 25 | – | – | |
| Phobius | 168 | 190 | 23 | – | – | |
| TMHMM | 168 | 190 | 23 | – | – | |
| Phobius | 191 | 193 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0070029.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0070029.1, powered by CORGI.
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