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Lj0g3v0072739.2

Overview

Field Value
Gene ID Lj0g3v0072739
Transcript ID Lj0g3v0072739.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: mitochondrial import receptor subunit TOM20-like [Cicer arietinum] gi|502091745|ref|XP_004489624.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProDom
PD102047
1 198 198 4.00E-65 –
Phobius
CYTOPLASMIC_DOMAIN
1 174 174 – –
PANTHER
PTHR32409
2 206 205 8.20E-123 –
PANTHER
PTHR32409:SF3
2 206 205 8.20E-123
IPR010547
Pfam
PF06552
8 197 190 1.60E-92
IPR010547
Gene3D
G3DSA:1.25.40.10
14 123 110 2.10E-08
IPR011990
SUPERFAMILY
SSF48452
14 124 111 6.83E-18
IPR011990
MobiDBLite
mobidb-lite
147 168 22 – –
Phobius
TRANSMEMBRANE
175 195 21 – –
TMHMM
TMhelix
179 196 18 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
196 207 12 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0005742
Cellular component Mitochondrial outer membrane translocase complex A large complex of the mitochondrial outer membrane that mediates transport of proteins into all mitochondrial compartments.
Subterm of
GO:0045040
Biological process Protein import into mitochondrial outer membrane The process comprising the insertion of proteins from outside the organelle into the mitochondrial outer membrane, mediated by large outer membrane translocase complexes.
Subterm of
Part of

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj0g3v0072739.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0072739.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.