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Lj0g3v0073239.1

Overview

Field Value
Gene ID Lj0g3v0073239
Transcript ID Lj0g3v0073239.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: checkpoint serine/threonine-protein kinase BUB1-like [Glycine max] gi|356544986|ref|XP_003540927.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR14030
1 411 411 5.40E-287
IPR015661
ProSiteProfiles
PS51489
1 89 89 18.138
IPR013212
PANTHER
PTHR14030:SF6
1 411 411 5.40E-287 –
Gene3D
G3DSA:3.30.200.20
142 273 132 6.90E-14 –
SUPERFAMILY
SSF56112
151 383 233 5.13E-29
IPR011009
SMART
SM00220
154 406 253 2.20E-07
IPR000719
ProSiteProfiles
PS50011
154 416 263 16.033
IPR000719
Pfam
PF00069
154 371 218 3.60E-12
IPR000719
Gene3D
G3DSA:1.10.510.10
274 335 62 2.70E-08 –
ProSitePatterns
PS00108
275 287 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of
GO:0007094
Biological process Mitotic spindle assembly checkpoint A cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj0g3v0073239.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0073239.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.