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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0073339 |
| Transcript ID | Lj0g3v0073339.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: EIN3-binding F-box protein 1-like isoform 1 [Glycine max] gi|356507724|ref|XP_003522614.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 12 | 34 | 23 | – | – | |
| Phobius | 35 | 54 | 20 | – | – | |
| TMHMM | 52 | 74 | 23 | – | – | |
| Phobius | 55 | 73 | 19 | – | – | |
| Phobius | 74 | 687 | 614 | – | – | |
| PANTHER | 106 | 336 | 231 | 3.10E-253 | – | |
| PANTHER | 106 | 336 | 231 | 3.10E-253 | – | |
| Gene3D | 107 | 152 | 46 | 1.20E-49 | ||
| SUPERFAMILY | 109 | 147 | 39 | 2.09E-07 | ||
| Pfam | 111 | 149 | 39 | 2.10E-06 | ||
| SMART | 114 | 155 | 42 | 4.10E-06 | ||
| Gene3D | 204 | 475 | 272 | 1.20E-49 | ||
| SUPERFAMILY | 230 | 320 | 91 | 2.80E-35 | – | |
| SMART | 233 | 258 | 26 | 0.027 | ||
| SMART | 259 | 284 | 26 | 1.00E-04 | ||
| Pfam | 284 | 307 | 24 | 0.57 | ||
| SMART | 285 | 310 | 26 | 6.20E-04 | ||
| SMART | 311 | 335 | 25 | 9.6 | ||
| PANTHER | 364 | 571 | 208 | 3.10E-253 | – | |
| PANTHER | 364 | 571 | 208 | 3.10E-253 | – | |
| SMART | 390 | 415 | 26 | 0.018 | ||
| SUPERFAMILY | 401 | 417 | 17 | 2.80E-35 | – | |
| SMART | 416 | 441 | 26 | 7.5 | ||
| SMART | 442 | 467 | 26 | 60 | ||
| SUPERFAMILY | 444 | 680 | 237 | 2.80E-35 | – | |
| Gene3D | 476 | 680 | 205 | 6.40E-32 | ||
| SMART | 496 | 521 | 26 | 7.6 | ||
| SMART | 522 | 547 | 26 | 3.5 | ||
| SMART | 549 | 574 | 26 | 3.9 | ||
| SMART | 576 | 601 | 26 | 9.6 | ||
| Pfam | 577 | 599 | 23 | 0.058 | ||
| PANTHER | 589 | 623 | 35 | 3.10E-253 | – | |
| PANTHER | 589 | 623 | 35 | 3.10E-253 | – | |
| SMART | 602 | 626 | 25 | 5.40E-04 | ||
| Pfam | 602 | 624 | 23 | 0.011 | ||
| SMART | 628 | 653 | 26 | 11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0073339.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0073339.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.