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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0080919 |
| Transcript ID | Lj0g3v0080919.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: aspartic proteinase oryzasin-1-like [Glycine max] gi|356556454|ref|XP_003546541.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| ProSiteProfiles | 1 | 22 | 22 | 5 | – | |
| PANTHER | 2 | 306 | 305 | 3.10E-237 | ||
| PANTHER | 2 | 306 | 305 | 3.10E-237 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 7 | 20 | 14 | – | – | |
| SUPERFAMILY | 10 | 316 | 307 | 1.35E-104 | ||
| Phobius | 21 | 25 | 5 | – | – | |
| Phobius | 26 | 505 | 480 | – | – | |
| Gene3D | 72 | 160 | 89 | 1.10E-27 | ||
| Pfam | 80 | 504 | 425 | 3.50E-112 | ||
| ProSiteProfiles | 81 | 502 | 422 | 67.447 | ||
| PRINTS | 87 | 107 | 21 | 8.90E-26 | ||
| ProSitePatterns | 96 | 107 | 12 | – | ||
| Gene3D | 161 | 308 | 148 | 1.10E-83 | ||
| PRINTS | 233 | 246 | 14 | 8.90E-26 | ||
| ProSitePatterns | 283 | 294 | 12 | – | ||
| PRINTS | 283 | 294 | 12 | 8.90E-26 | ||
| Gene3D | 309 | 348 | 40 | 1.20E-07 | ||
| ProSiteProfiles | 311 | 351 | 41 | 11.296 | ||
| SUPERFAMILY | 313 | 414 | 102 | 1.57E-21 | ||
| Pfam | 315 | 347 | 33 | 2.30E-12 | ||
| ProSiteProfiles | 375 | 416 | 42 | 10.376 | ||
| Gene3D | 377 | 418 | 42 | 5.80E-05 | ||
| Pfam | 377 | 414 | 38 | 8.10E-09 | ||
| PANTHER | 407 | 505 | 99 | 3.10E-237 | – | |
| PANTHER | 407 | 505 | 99 | 3.10E-237 | ||
| SUPERFAMILY | 421 | 504 | 84 | 1.35E-104 | ||
| Gene3D | 422 | 504 | 83 | 1.10E-83 | ||
| PRINTS | 478 | 493 | 16 | 8.90E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of Lj0g3v0080919.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0080919.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.