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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0084459 |
| Transcript ID | Lj0g3v0084459.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transmembrane 9 superfamily member 4-like [Cicer arietinum] gi|502134369|ref|XP_004502094.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | – | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| PANTHER | 1 | 182 | 182 | 0 | ||
| PANTHER | 1 | 182 | 182 | 0 | – | |
| TMHMM | 9 | 31 | 23 | – | – | |
| Phobius | 10 | 21 | 12 | – | – | |
| Phobius | 22 | 27 | 6 | – | – | |
| Phobius | 28 | 292 | 265 | – | – | |
| Pfam | 59 | 611 | 553 | 5.90E-182 | ||
| PANTHER | 205 | 659 | 455 | 0 | – | |
| PANTHER | 205 | 659 | 455 | 0 | ||
| TMHMM | 293 | 315 | 23 | – | – | |
| Phobius | 293 | 315 | 23 | – | – | |
| Coils | 315 | 335 | 21 | – | – | |
| Phobius | 316 | 367 | 52 | – | – | |
| TMHMM | 368 | 390 | 23 | – | – | |
| Phobius | 368 | 387 | 20 | – | – | |
| Phobius | 388 | 392 | 5 | – | – | |
| Phobius | 393 | 417 | 25 | – | – | |
| TMHMM | 395 | 417 | 23 | – | – | |
| Phobius | 418 | 428 | 11 | – | – | |
| Phobius | 429 | 454 | 26 | – | – | |
| TMHMM | 430 | 452 | 23 | – | – | |
| Phobius | 455 | 465 | 11 | – | – | |
| Phobius | 466 | 488 | 23 | – | – | |
| TMHMM | 467 | 489 | 23 | – | – | |
| Phobius | 489 | 515 | 27 | – | – | |
| TMHMM | 516 | 538 | 23 | – | – | |
| Phobius | 516 | 542 | 27 | – | – | |
| Phobius | 543 | 547 | 5 | – | – | |
| Phobius | 548 | 571 | 24 | – | – | |
| TMHMM | 548 | 570 | 23 | – | – | |
| Phobius | 572 | 582 | 11 | – | – | |
| TMHMM | 583 | 605 | 23 | – | – | |
| Phobius | 583 | 603 | 21 | – | – | |
| Phobius | 604 | 622 | 19 | – | – | |
| Phobius | 623 | 649 | 27 | – | – | |
| TMHMM | 627 | 649 | 23 | – | – | |
| Phobius | 650 | 659 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0084459.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0084459.1, powered by CORGI.
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