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Lj0g3v0084889.1

Overview

Field Value
Gene ID Lj0g3v0084889
Transcript ID Lj0g3v0084889.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: proline-rich receptor-like protein kinase PERK12-like [Glycine max] gi|356524047|ref|XP_003530644.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF56112
29 133 105 7.38E-24
IPR011009
PANTHER
PTHR27001:SF36
32 133 102 3.80E-68 –
PANTHER
PTHR27001
32 133 102 3.80E-68 –
Gene3D
G3DSA:2.60.120.200
38 68 31 4.10E-07
IPR013320
ProSiteProfiles
PS50011
55 133 79 13.517
IPR000719
Pfam
PF07714
60 132 73 3.30E-13
IPR001245
ProSitePatterns
PS00107
61 83 23 –
IPR017441
Gene3D
G3DSA:3.30.200.20
69 132 64 3.60E-28 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj0g3v0084889.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0084889.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.