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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0090469 |
| Transcript ID | Lj0g3v0090469.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phototropin-2-like [Glycine max] gi|356559155|ref|XP_003547866.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 92 | 92 | – | – | |
| MobiDBLite | 139 | 159 | 21 | – | – | |
| ProSiteProfiles | 162 | 235 | 74 | 11.52 | ||
| SMART | 164 | 233 | 70 | 0.05 | ||
| Gene3D | 176 | 280 | 105 | 2.70E-33 | – | |
| Pfam | 183 | 279 | 97 | 2.90E-18 | ||
| SUPERFAMILY | 183 | 275 | 93 | 2.23E-24 | ||
| TIGRFAM | 189 | 279 | 91 | 5.00E-10 | ||
| CDD | 189 | 278 | 90 | 1.19E-08 | – | |
| ProSiteProfiles | 236 | 290 | 55 | 11.119 | ||
| SMART | 239 | 281 | 43 | 3.20E-05 | ||
| PANTHER | 348 | 655 | 308 | 2.10E-164 | – | |
| PANTHER | 348 | 655 | 308 | 2.10E-164 | – | |
| MobiDBLite | 360 | 404 | 45 | – | – | |
| ProSiteProfiles | 441 | 514 | 74 | 10.458 | ||
| SMART | 443 | 512 | 70 | 2.6 | ||
| Gene3D | 455 | 558 | 104 | 6.90E-31 | – | |
| SUPERFAMILY | 460 | 556 | 97 | 3.77E-24 | ||
| Pfam | 464 | 556 | 93 | 2.00E-19 | ||
| CDD | 464 | 556 | 93 | 2.28E-10 | – | |
| TIGRFAM | 467 | 556 | 90 | 2.10E-11 | ||
| ProSiteProfiles | 515 | 569 | 55 | 11.651 | ||
| SMART | 518 | 560 | 43 | 1.30E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0090469.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0090469.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.