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Lj0g3v0103599.1

Overview

Field Value
Gene ID Lj0g3v0103599
Transcript ID Lj0g3v0103599.1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24015:SF854
3 182 180 1.40E-119 –
PANTHER
PTHR24015
3 182 180 1.40E-119 –
Pfam
PF13041
4 52 49 3.10E-12
IPR002885
ProSiteProfiles
PS51375
4 38 35 11.948
IPR002885
TIGRFAM
TIGR00756
8 40 33 4.00E-08
IPR002885
ProSiteProfiles
PS51375
39 74 36 7.213
IPR002885
ProSiteProfiles
PS51375
75 105 31 6.237
IPR002885
SUPERFAMILY
SSF48452
82 163 82 1.30E-05
IPR011990
ProSiteProfiles
PS51375
107 137 31 7.081
IPR002885
Gene3D
G3DSA:1.25.40.10
107 218 112 1.40E-06
IPR011990
ProSiteProfiles
PS51375
141 175 35 8.111
IPR002885
Pfam
PF14432
178 302 125 7.10E-38
IPR032867
Gene3D
G3DSA:1.25.40.10
262 289 28 1.40E-06
IPR011990

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj0g3v0103599.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0103599.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.