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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0104399 |
| Transcript ID | Lj0g3v0104399.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NHL domain-containing protein isoform 2 [Theobroma cacao] gi|508708508|gb|EOY00405.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| TMHMM | 5 | 24 | 20 | – | – | |
| Phobius | 5 | 16 | 12 | – | – | |
| Phobius | 17 | 23 | 7 | – | – | |
| Phobius | 24 | 270 | 247 | – | – | |
| TMHMM | 44 | 66 | 23 | – | – | |
| PANTHER | 59 | 498 | 440 | 4.50E-291 | – | |
| PANTHER | 59 | 498 | 440 | 4.50E-291 | – | |
| Gene3D | 91 | 258 | 168 | 4.80E-17 | ||
| SUPERFAMILY | 101 | 258 | 158 | 5.49E-10 | – | |
| Pfam | 173 | 198 | 26 | 8.80E-05 | ||
| TMHMM | 267 | 289 | 23 | – | – | |
| Phobius | 271 | 291 | 21 | – | – | |
| Phobius | 292 | 499 | 208 | – | – | |
| MobiDBLite | 404 | 424 | 21 | – | – | |
| MobiDBLite | 449 | 478 | 30 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0104399.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0104399.1, powered by CORGI.
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