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Lj0g3v0112099.1

Overview

Field	Value
Gene ID	Lj0g3v0112099
Transcript ID	Lj0g3v0112099.1
Lotus japonicus genome version	MG20 v3.0
Description	PREDICTED: vacuolar proton ATPase a1-like [Cicer arietinum] gi\|502082366\|ref\|XP_004487144.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
PANTHER	PTHR11629:SF72 View details on PTHR11629:SF72 Search for proteins/transripts with this domain View external data on PTHR11629:SF72	1	325	325	1.60E-250	–
PANTHER	PTHR11629 View details on PTHR11629 Search for proteins/transripts with this domain View external data on PTHR11629	1	325	325	1.60E-250	IPR002490 Show description in modal box View details on IPR002490 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF01496 View details on PF01496 Search for proteins/transripts with this domain View external data on PF01496	1	325	325	9.60E-80	IPR002490 Show description in modal box View details on IPR002490 Search for proteins/transripts with this domain View on EBI InterPro Service
Coils	Coil View details on Coil Search for proteins/transripts with this domain	31	58	28	–	–

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0015078 View details of GO:0015078 AmiGO InterPro QuickGO	Molecular function	Proton transmembrane transporter activity	Enables the transfer of a proton from one side of a membrane to the other.	Subterm of View details of GO:0015077
GO:0033179 View details of GO:0033179 AmiGO InterPro QuickGO	Cellular component	Proton-transporting V-type ATPase, V0 domain	A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring.	Subterm of View details of GO:0033177 Part of View details of GO:0033176
GO:1902600 View details of GO:1902600 AmiGO InterPro QuickGO	Biological process	Proton transmembrane transport	The directed movement of a proton across a membrane.	Subterm of View details of GO:0015672 View details of GO:0098662

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj0g3v0112099.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0112099.1, powered by CORGI.

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