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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002490
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We have found 25 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.674s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0005539.1
n.a. PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like [Glycine max] gi|356547204|ref|XP_003542006.1| chr0 2076882 2077332 -
2 domain predictions
3 GO terms
Lj0g3v0009329.1
n.a. PREDICTED: vacuolar proton ATPase a1-like [Cicer arietinum] gi|502082366|ref|XP_004487144.1| chr0 3844609 3852036 -
3 domain predictions
3 GO terms
Lj0g3v0112099.1
n.a. PREDICTED: vacuolar proton ATPase a1-like [Cicer arietinum] gi|502082366|ref|XP_004487144.1| chr0 48731658 48734312 +
3 domain predictions
3 GO terms
Lj0g3v0228679.1
n.a. PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like [Glycine max] gi|356558433|ref|XP_003547511.1| chr0 118252599 118265602 -
3 domain predictions
3 GO terms
Lj0g3v0240579.1
n.a. PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like [Glycine max] gi|356558433|ref|XP_003547511.1| chr0 124853894 124854876 +
3 domain predictions
3 GO terms
Lj0g3v0314609.1
n.a. n.a. chr0 164221912 164223880 +
3 domain predictions
3 GO terms
Lj3g3v0129330.1
n.a. CM0216.490.nc [Lotus japonicus] gi|164605517|dbj|BAF98583.1| chr3 985570 987465 -
3 domain predictions
3 GO terms
Lj3g3v0129340.1
n.a. CM0216.490.nc [Lotus japonicus] gi|164605517|dbj|BAF98583.1| chr3 987460 990112 -
3 domain predictions
3 GO terms
Lj3g3v0129350.1
n.a. CM0216.490.nc [Lotus japonicus] gi|164605517|dbj|BAF98583.1| chr3 990132 992909 -
3 domain predictions
3 GO terms
Lj3g3v0129360.1
n.a. V-type proton ATPase 116 kDa subunit a isoform [Medicago truncatula] gi|357473431|ref|XP_003607000.1| chr3 992856 994509 -
3 domain predictions
3 GO terms
Lj3g3v3087270.1
n.a. PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like [Glycine max] gi|356542569|ref|XP_003539739.1| chr3 38865117 38875120 +
3 domain predictions
3 GO terms
Lj3g3v3087270.2
n.a. PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like [Glycine max] gi|356542569|ref|XP_003539739.1| chr3 38865117 38875120 +
3 domain predictions
3 GO terms
LotjaGi1g1v0424500.1
n.a. V-type proton ATPase subunit a; TAIR: AT4G39080.1 vacuolar proton ATPase A3; Swiss-Prot: sp|Q8W4S4|VHAA3_ARATH V-type proton ATPase subunit a3; TrEMBL-Plants: tr|A0A151RQM9|A0A151RQM9_CAJCA V-type proton ATPase subunit a; Found in the gene: LotjaGi1g1v0424500 LjG1.1_chr1 91898044 91904261 -
3 domain predictions
3 GO terms
LotjaGi1g1v0424500.2
n.a. V-type proton ATPase subunit a; TAIR: AT2G21410.1 vacuolar proton ATPase A2; Swiss-Prot: sp|Q9SJT7|VHAA2_ARATH V-type proton ATPase subunit a2; TrEMBL-Plants: tr|I1K7M8|I1K7M8_SOYBN V-type proton ATPase subunit a; Found in the gene: LotjaGi1g1v0424500 LjG1.1_chr1 91898515 91900650 -
3 domain predictions
3 GO terms
LotjaGi2g1v0364600.1
n.a. V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|I1LR08|I1LR08_SOYBN V-type proton ATPase subunit a; Found in the gene: LotjaGi2g1v0364600 LjG1.1_chr2 86202241 86213044 +
3 domain predictions
3 GO terms
LotjaGi2g1v0364600.2
n.a. V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|A0A1J7GFZ0|A0A1J7GFZ0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0364600 LjG1.1_chr2 86202587 86212456 +
3 domain predictions
3 GO terms
LotjaGi2g1v0364600.3
n.a. V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|A0A1J7GFZ0|A0A1J7GFZ0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0364600 LjG1.1_chr2 86202587 86213014 +
3 domain predictions
3 GO terms
LotjaGi2g1v0364600.4
n.a. V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|A0A1J7GFZ0|A0A1J7GFZ0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0364600 LjG1.1_chr2 86202593 86212456 +
3 domain predictions
3 GO terms
LotjaGi2g1v0364600.5
n.a. V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|A0A0R0H303|A0A0R0H303_SOYBN V-type proton ATPase subunit a; Found in the gene: LotjaGi2g1v0364600 LjG1.1_chr2 86205405 86212456 +
3 domain predictions
3 GO terms
LotjaGi3g1v0273900.1
n.a. V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|K7M9K9|K7M9K9_SOYBN V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0273900 LjG1.1_chr3 53490651 53513237 +
3 domain predictions
3 GO terms
LotjaGi3g1v0273900.2
n.a. V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|A0A0S3SGJ3|A0A0S3SGJ3_PHAAN V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0273900 LjG1.1_chr3 53490977 53512190 +
3 domain predictions
3 GO terms
LotjaGi3g1v0273900.3
n.a. V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|A0A0S3SGJ3|A0A0S3SGJ3_PHAAN V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0273900 LjG1.1_chr3 53490977 53512190 +
3 domain predictions
3 GO terms
LotjaGi3g1v0273900.4
n.a. V-type proton ATPase subunit a; TAIR: AT2G28520.1 vacuolar proton ATPase A1; Swiss-Prot: sp|Q8RWZ7|VHAA1_ARATH V-type proton ATPase subunit a1; TrEMBL-Plants: tr|V7BYX1|V7BYX1_PHAVU V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0273900 LjG1.1_chr3 53502625 53512190 +
3 domain predictions
3 GO terms
LotjaGi3g1v0512800.1
n.a. V-type proton ATPase subunit a; TAIR: AT4G39080.1 vacuolar proton ATPase A3; Swiss-Prot: sp|Q8W4S4|VHAA3_ARATH V-type proton ATPase subunit a3; TrEMBL-Plants: tr|B0BL94|B0BL94_LOTJA V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0512800 LjG1.1_chr3 92949466 92958993 -
3 domain predictions
3 GO terms
LotjaGi3g1v0512800.2
n.a. V-type proton ATPase subunit a; TAIR: AT4G39080.1 vacuolar proton ATPase A3; Swiss-Prot: sp|Q8W4S4|VHAA3_ARATH V-type proton ATPase subunit a3; TrEMBL-Plants: tr|B0BL94|B0BL94_LOTJA V-type proton ATPase subunit a; Found in the gene: LotjaGi3g1v0512800 LjG1.1_chr3 92950232 92958781 -
3 domain predictions
3 GO terms