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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0115479 |
| Transcript ID | Lj0g3v0115479.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | high affinity ammonium transporter [Lotus japonicus] gi|232782268|gb|ACQ91094.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 485 | 485 | 0 | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| PANTHER | 1 | 485 | 485 | 0 | ||
| Gene3D | 19 | 423 | 405 | 2.50E-113 | ||
| SUPERFAMILY | 20 | 423 | 404 | 1.29E-98 | ||
| TIGRFAM | 25 | 441 | 417 | 7.50E-112 | ||
| Pfam | 27 | 441 | 415 | 1.50E-81 | ||
| Phobius | 27 | 49 | 23 | – | – | |
| TMHMM | 30 | 52 | 23 | – | – | |
| Phobius | 50 | 60 | 11 | – | – | |
| TMHMM | 57 | 79 | 23 | – | – | |
| Phobius | 61 | 80 | 20 | – | – | |
| Phobius | 81 | 118 | 38 | – | – | |
| TMHMM | 116 | 138 | 23 | – | – | |
| Phobius | 119 | 139 | 21 | – | – | |
| PRINTS | 122 | 138 | 17 | 6.60E-06 | ||
| Phobius | 140 | 145 | 6 | – | – | |
| TMHMM | 143 | 165 | 23 | – | – | |
| Phobius | 146 | 172 | 27 | – | – | |
| Phobius | 173 | 183 | 11 | – | – | |
| ProSitePatterns | 179 | 204 | 26 | – | ||
| TMHMM | 180 | 202 | 23 | – | – | |
| Phobius | 184 | 202 | 19 | – | – | |
| Phobius | 203 | 213 | 11 | – | – | |
| Phobius | 214 | 234 | 21 | – | – | |
| TMHMM | 215 | 234 | 20 | – | – | |
| PRINTS | 218 | 236 | 19 | 6.60E-06 | ||
| Phobius | 235 | 245 | 11 | – | – | |
| Phobius | 246 | 270 | 25 | – | – | |
| PRINTS | 249 | 271 | 23 | 6.60E-06 | ||
| TMHMM | 249 | 271 | 23 | – | – | |
| Phobius | 271 | 276 | 6 | – | – | |
| TMHMM | 276 | 298 | 23 | – | – | |
| Phobius | 277 | 295 | 19 | – | – | |
| Phobius | 296 | 300 | 5 | – | – | |
| Phobius | 301 | 322 | 22 | – | – | |
| TMHMM | 302 | 321 | 20 | – | – | |
| Phobius | 323 | 333 | 11 | – | – | |
| TMHMM | 334 | 356 | 23 | – | – | |
| Phobius | 334 | 356 | 23 | – | – | |
| Phobius | 357 | 389 | 33 | – | – | |
| Phobius | 390 | 419 | 30 | – | – | |
| TMHMM | 392 | 414 | 23 | – | – | |
| Phobius | 420 | 485 | 66 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ammonium transmembrane transporter activity | Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Biological process | Ammonium transport | The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Ammonium transmembrane transport | The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. |
Expression pattern of Lj0g3v0115479.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0115479.1, powered by CORGI.
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