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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002229
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.663s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0115479.1
n.a. high affinity ammonium transporter [Lotus japonicus] gi|232782268|gb|ACQ91094.1| chr0 50753025 50755937 -
2 domain predictions
1 GO term
Lj1g3v2372380.1
n.a. Ammonium transporter 3 member [Medicago truncatula] gi|357506079|ref|XP_003623328.1| chr1 27861357 27865569 -
2 domain predictions
1 GO term
Lj1g3v4959910.1
n.a. PREDICTED: ammonium transporter 3 member 1-like [Glycine max] gi|356571182|ref|XP_003553758.1| chr1 60543967 60548146 +
2 domain predictions
1 GO term
LotjaGi1g1v0444300.1
n.a. Ammonium transporter; TAIR: AT2G38290.1 ammonium transporter 2; Swiss-Prot: sp|Q84KJ6|AMT31_ORYSJ Ammonium transporter 3 member 1; TrEMBL-Plants: tr|G7KSC5|G7KSC5_MEDTR Ammonium transporter; Found in the gene: LotjaGi1g1v0444300 LjG1.1_chr1 94186226 94195172 -
2 domain predictions
1 GO term
LotjaGi1g1v0444300.2
n.a. Ammonium transporter; TAIR: AT2G38290.1 ammonium transporter 2; Swiss-Prot: sp|Q8S230|AMT22_ORYSJ Ammonium transporter 2 member 2; TrEMBL-Plants: tr|M5VY13|M5VY13_PRUPE Ammonium transporter; Found in the gene: LotjaGi1g1v0444300 LjG1.1_chr1 94192872 94194833 -
2 domain predictions
1 GO term
LotjaGi1g1v0781000.1
n.a. Ammonium transporter; TAIR: AT2G38290.1 ammonium transporter 2; Swiss-Prot: sp|Q84KJ6|AMT31_ORYSJ Ammonium transporter 3 member 1; TrEMBL-Plants: tr|I1NC92|I1NC92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0781000 LjG1.1_chr1 135326350 135330731 -
2 domain predictions
1 GO term
LotjaGi2g1v0018400.1
n.a. Ammonium transporter; TAIR: AT2G38290.1 ammonium transporter 2; Swiss-Prot: sp|Q84KJ6|AMT31_ORYSJ Ammonium transporter 3 member 1; TrEMBL-Plants: tr|C4NY35|C4NY35_LOTJA Ammonium transporter; Found in the gene: LotjaGi2g1v0018400 LjG1.1_chr2 6616142 6618869 -
2 domain predictions
1 GO term
LotjaGi3g1v0196500.1
n.a. Ammonium transporter; TAIR: AT2G38290.1 ammonium transporter 2; Swiss-Prot: sp|Q84KJ6|AMT31_ORYSJ Ammonium transporter 3 member 1; TrEMBL-Plants: tr|Q93X02|Q93X02_LOTJA Ammonium transporter; Found in the gene: LotjaGi3g1v0196500 LjG1.1_chr3 28594463 28610967 -
2 domain predictions
1 GO term