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Lj0g3v0117999.1

Overview

Field Value
Gene ID Lj0g3v0117999
Transcript ID Lj0g3v0117999.1
Lotus japonicus genome version MG20 v3.0
Description Kinesin light chain [Medicago truncatula] gi|357461993|ref|XP_003601278.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 217 217 – –
PANTHER
PTHR19959:SF156
52 71 20 1.50E-193 –
PANTHER
PTHR19959
52 71 20 1.50E-193 –
PANTHER
PTHR19959:SF156
229 491 263 1.50E-193 –
PANTHER
PTHR19959
229 491 263 1.50E-193 –
Gene3D
G3DSA:1.25.40.10
236 343 108 3.10E-08
IPR011990
SUPERFAMILY
SSF48452
283 432 150 9.39E-16
IPR011990
SMART
SM00028
284 317 34 190
IPR019734
ProSiteProfiles
PS50005
284 317 34 5.133
IPR019734
Pfam
PF13374
285 313 29 0.0071
IPR011990
SMART
SM00028
327 360 34 17
IPR019734
ProSiteProfiles
PS50005
327 360 34 5.458
IPR019734
Gene3D
G3DSA:1.25.40.10
344 408 65 4.40E-09
IPR011990
SMART
SM00028
369 402 34 76
IPR019734
SUPERFAMILY
SSF48452
414 480 67 6.20E-06
IPR011990
Gene3D
G3DSA:1.25.40.10
418 483 66 3.30E-06
IPR011990
ProSiteProfiles
PS50293
451 484 34 8.89
IPR013026
SMART
SM00028
451 484 34 2.9
IPR019734
ProSiteProfiles
PS50005
451 484 34 8.88
IPR019734
Pfam
PF13181
456 479 24 8.30E-04
IPR019734

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj0g3v0117999.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0117999.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.