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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0132319 |
| Transcript ID | Lj0g3v0132319.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transport protein 10-like [Glycine max] gi|356530254|ref|XP_003533697.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | – | – | |
| PANTHER | 8 | 474 | 467 | 0 | – | |
| PANTHER | 8 | 474 | 467 | 0 | – | |
| Phobius | 18 | 38 | 21 | – | – | |
| TMHMM | 20 | 42 | 23 | – | – | |
| ProSiteProfiles | 25 | 450 | 426 | 36.112 | ||
| SUPERFAMILY | 26 | 458 | 433 | 1.12E-49 | ||
| PRINTS | 33 | 43 | 11 | 3.10E-29 | ||
| Gene3D | 39 | 188 | 150 | 1.30E-18 | – | |
| Phobius | 39 | 80 | 42 | – | – | |
| CDD | 69 | 447 | 379 | 5.82E-19 | ||
| Pfam | 77 | 188 | 112 | 4.40E-11 | ||
| TMHMM | 81 | 103 | 23 | – | – | |
| Phobius | 81 | 100 | 20 | – | – | |
| Phobius | 101 | 111 | 11 | – | – | |
| Phobius | 112 | 131 | 20 | – | – | |
| TMHMM | 113 | 131 | 19 | – | – | |
| Phobius | 132 | 136 | 5 | – | – | |
| TMHMM | 136 | 158 | 23 | – | – | |
| Phobius | 137 | 158 | 22 | – | – | |
| PRINTS | 137 | 156 | 20 | 3.10E-29 | ||
| ProSitePatterns | 142 | 167 | 26 | – | ||
| Phobius | 159 | 169 | 11 | – | – | |
| Phobius | 170 | 188 | 19 | – | – | |
| TMHMM | 173 | 195 | 23 | – | – | |
| Phobius | 189 | 264 | 76 | – | – | |
| Pfam | 191 | 461 | 271 | 3.80E-73 | ||
| Gene3D | 255 | 455 | 201 | 4.10E-14 | – | |
| TMHMM | 261 | 283 | 23 | – | – | |
| Phobius | 265 | 287 | 23 | – | – | |
| PRINTS | 267 | 277 | 11 | 3.10E-29 | ||
| Phobius | 288 | 293 | 6 | – | – | |
| TMHMM | 293 | 315 | 23 | – | – | |
| Phobius | 294 | 315 | 22 | – | – | |
| ProSitePatterns | 311 | 328 | 18 | – | ||
| Phobius | 316 | 326 | 11 | – | – | |
| TMHMM | 322 | 344 | 23 | – | – | |
| Phobius | 327 | 348 | 22 | – | – | |
| Phobius | 349 | 359 | 11 | – | – | |
| Phobius | 360 | 378 | 19 | – | – | |
| PRINTS | 363 | 384 | 22 | 3.10E-29 | ||
| TMHMM | 364 | 386 | 23 | – | – | |
| Phobius | 379 | 397 | 19 | – | – | |
| PRINTS | 386 | 398 | 13 | 3.10E-29 | ||
| Phobius | 398 | 420 | 23 | – | – | |
| TMHMM | 399 | 421 | 23 | – | – | |
| Phobius | 421 | 426 | 6 | – | – | |
| TMHMM | 425 | 447 | 23 | – | – | |
| Phobius | 427 | 446 | 20 | – | – | |
| Phobius | 447 | 487 | 41 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0132319.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0132319.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.