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Lj0g3v0147679.1

Overview

Field Value
Gene ID Lj0g3v0147679
Transcript ID Lj0g3v0147679.1
Lotus japonicus genome version MG20 v3.0
Description MYB transcription factor MYB181 [Glycine max] gi|351726530|ref|NP_001235850.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10641:SF469
1 199 199 1.90E-63 –
PANTHER
PTHR10641
1 199 199 1.90E-63 –
ProSiteProfiles
PS51294
11 100 90 12.465
IPR017930
SUPERFAMILY
SSF46689
13 92 80 7.35E-14
IPR009057
Gene3D
G3DSA:1.10.10.60
15 38 24 6.70E-18
IPR009057
SMART
SM00717
15 98 84 1.60E-09
IPR001005
Pfam
PF00249
16 46 31 1.40E-06
IPR001005
Pfam
PF00249
60 94 35 8.50E-09
IPR001005
CDD
cd00167
64 94 31 1.37E-08 –
Gene3D
G3DSA:1.10.10.60
73 139 67 1.10E-05
IPR009057
Coils
Coil
89 109 21 – –
MobiDBLite
mobidb-lite
102 155 54 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj0g3v0147679.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0147679.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.