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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0163319 |
| Transcript ID | Lj0g3v0163319.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transporter ERD6-like 7-like [Cicer arietinum] gi|502109384|ref|XP_004493632.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 38 | 38 | – | – | |
| PANTHER | 2 | 476 | 475 | 0 | – | |
| PANTHER | 2 | 476 | 475 | 0 | – | |
| TIGRFAM | 32 | 470 | 439 | 1.50E-87 | ||
| TMHMM | 38 | 60 | 23 | – | – | |
| Phobius | 39 | 61 | 23 | – | – | |
| SUPERFAMILY | 44 | 228 | 185 | 7.72E-56 | ||
| ProSiteProfiles | 44 | 464 | 421 | 42.471 | ||
| CDD | 55 | 460 | 406 | 3.03E-21 | ||
| Gene3D | 57 | 223 | 167 | 1.80E-21 | – | |
| Pfam | 60 | 473 | 414 | 4.70E-87 | ||
| Phobius | 62 | 80 | 19 | – | – | |
| TMHMM | 80 | 102 | 23 | – | – | |
| Phobius | 81 | 102 | 22 | – | – | |
| ProSitePatterns | 98 | 115 | 18 | – | ||
| Phobius | 103 | 108 | 6 | – | – | |
| TMHMM | 109 | 126 | 18 | – | – | |
| Phobius | 109 | 128 | 20 | – | – | |
| Phobius | 129 | 139 | 11 | – | – | |
| PRINTS | 135 | 154 | 20 | 5.70E-16 | ||
| TMHMM | 139 | 161 | 23 | – | – | |
| Phobius | 140 | 160 | 21 | – | – | |
| Phobius | 161 | 166 | 6 | – | – | |
| Phobius | 167 | 186 | 20 | – | – | |
| TMHMM | 168 | 190 | 23 | – | – | |
| Phobius | 187 | 191 | 5 | – | – | |
| Phobius | 192 | 213 | 22 | – | – | |
| TMHMM | 194 | 213 | 20 | – | – | |
| Phobius | 214 | 277 | 64 | – | – | |
| SUPERFAMILY | 257 | 471 | 215 | 7.72E-56 | ||
| TMHMM | 274 | 296 | 23 | – | – | |
| Phobius | 278 | 300 | 23 | – | – | |
| Gene3D | 279 | 470 | 192 | 9.80E-15 | – | |
| PRINTS | 288 | 298 | 11 | 5.70E-16 | ||
| Phobius | 301 | 305 | 5 | – | – | |
| Phobius | 306 | 333 | 28 | – | – | |
| TMHMM | 311 | 333 | 23 | – | – | |
| ProSitePatterns | 329 | 346 | 18 | – | ||
| Phobius | 334 | 339 | 6 | – | – | |
| Phobius | 340 | 362 | 23 | – | – | |
| TMHMM | 340 | 362 | 23 | – | – | |
| Phobius | 363 | 373 | 11 | – | – | |
| Phobius | 374 | 399 | 26 | – | – | |
| TMHMM | 377 | 399 | 23 | – | – | |
| PRINTS | 377 | 398 | 22 | 5.70E-16 | ||
| Phobius | 400 | 410 | 11 | – | – | |
| PRINTS | 400 | 412 | 13 | 5.70E-16 | ||
| TMHMM | 411 | 433 | 23 | – | – | |
| Phobius | 411 | 430 | 20 | – | – | |
| Phobius | 431 | 441 | 11 | – | – | |
| TMHMM | 438 | 460 | 23 | – | – | |
| Phobius | 442 | 460 | 19 | – | – | |
| Phobius | 461 | 477 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0163319.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0163319.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.